Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2442 ATGACTTTAAATCTTTGTGTACTGACCCCAAATCGAATTGTTTGGGATTCCGACGTGAAGGAAATTATTTTATCTACAAATACTGGACAAGTTGGAATATTACCCAATCACGCGCCTTTGGCTATGGCTTTAGATATAGGTATTTTGAGAATACGCCTTAACGACCAATGGTTAACTATGGCTCTGATGGGCGGTTTTGCTCGAATAGGCAATAATGAAATCACTGTTTTAGTAAATGATGCGGAAAAAGGAAGTGACATTGATCCACAAGAAGCACAACAAACTCTTGAAATAGCAGAAGCTAATTTAAAGGAGGCTAAGGGCAAGAGACAAACAATTGAGGCAAATCTAGCTCTCAGACGAGCTAGAACATGA 375 0.3893 MTLNLCVLTPNRIVWDSDVKEIILSTNTGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRRART* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2442 124 CDD F1-ATPase_delta 3 123 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lja4g2442 124 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 2 123 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lja4g2442 124 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 124 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lja4g2442 124 Coils Coil 96 116 - -
Lja4g2442 124 Pfam ATP synthase, Delta/Epsilon chain, long alpha-helix domain 86 123 IPR020547 -
Lja4g2442 124 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 1 82 IPR036771 -
Lja4g2442 124 Gene3D - 89 124 - -
Lja4g2442 124 Gene3D - 1 87 IPR036771 -
Lja4g2442 124 PANTHER ATP SYNTHASE EPSILON CHAIN, CHLOROPLASTIC 1 124 - -
Lja4g2442 124 Hamap ATP synthase epsilon chain [atpC]. 1 124 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lja4g2442 124 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 3 81 IPR020546 GO:0015986
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2442 18 120 Primary Pumps ATPases AT5G47030 26.923 1.91e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2442 K02114 - zju:27963853 232.261