Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2412 ATGAATGGAGAATTTTGTTCTTATCATAAGGAAACACCTGATTGGAACATAAAAGCAAGGAAAGCACTGCGAGCATTGAAAGGGTTGGTGAAGCTCCAGGCACTGGTGAGAGGTCAAATTGAGAGGAAGAGGACAGCAGAGTGGCTTAAAACAATGCAAGCACTGTTGCGAGCACAGACACGAGCCACTGCAGGAAGGACCCTGCACACCTCATATTCAAGTGCAAAGCAGCCATCTACATGCCAACTCCATTCTTCTGGTCCAGCAACACCAGAGAAATTTGAAAGCCCTGTCAAATCTAAGAGCACGAAACATGATCAGCAATCACCTGTACACAAGAGAAATGGCTCCAAATCCTGTGTCCTGCTTAGTGGCAATGAAGAGGGCCAGTTAGATGAACAATCATGGAAAAAAGTAAGATCACTCGTAAGAACCTACGCCAGGAACGAAGAAAAGGGCGATAGGATGCTTGAAATTGATTCTGGAAAGCCCCACTTCACCTCAAAACGCCGAAACCTCTCTTACTCTAACAGTGAGCCTCTAGGCTCAGAACATTGTTACAGTAAGAGCTTAACCACCACAAAAAGTTCTGAACATAGTTCTTCTTGTGAAGTTCAGTCCCACAACAACAACAACCCACTAAAACCATACGAGGTTGATGAGACTCCATTCTGCACTGCCAGCAACAGTCCCCAATTTTTCTCTGCCACTTCCAAAGATGATGGCTGCAAAAGAAGTCCTTTTAGTACTCCTACAAAGAGTGATGGCTCGAGAAGCTACCTTCGTGGTTATTCCGACTACCCAGGTTACATGGCTTACACCGAGTCATCGAAGGCAAAGGCGAGGTCTCTCAGTGCCCCGAAACAAAGGCCTCAACAATACGAGAGGTCCTGTTCGTCTAGCAGGTACTCGCTCAATGGATTTGAGATGTCAAGATTGGCCGCACAGAAGACTTTGCAAGCAAGCTTTACCAGCAAAGCGTATCCAGGTTCCGGTCGTTTGGACAAGCTTGGAATGCCTGTGGGGTATAGATTCTGA 1038 0.4634 MNGEFCSYHKETPDWNIKARKALRALKGLVKLQALVRGQIERKRTAEWLKTMQALLRAQTRATAGRTLHTSYSSAKQPSTCQLHSSGPATPEKFESPVKSKSTKHDQQSPVHKRNGSKSCVLLSGNEEGQLDEQSWKKVRSLVRTYARNEEKGDRMLEIDSGKPHFTSKRRNLSYSNSEPLGSEHCYSKSLTTTKSSEHSSSCEVQSHNNNNPLKPYEVDETPFCTASNSPQFFSATSKDDGCKRSPFSTPTKSDGSRSYLRGYSDYPGYMAYTESSKAKARSLSAPKQRPQQYERSCSSSRYSLNGFEMSRLAAQKTLQASFTSKAYPGSGRLDKLGMPVGYRF* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2412 345 PANTHER IQ-DOMAIN 5-RELATED 19 340 - -
Lja4g2412 345 ProSiteProfiles IQ motif profile. 27 54 IPR000048 GO:0005515
Lja4g2412 345 MobiDBLite consensus disorder prediction 67 118 - -
Lja4g2412 345 PANTHER CALMODULIN BINDING PROTEIN IQD22 19 340 - -
Lja4g2412 345 Pfam Protein of unknown function (DUF4005) 230 306 IPR025064 -
Lja4g2412 345 MobiDBLite consensus disorder prediction 159 186 - -
Lja4g2412 345 MobiDBLite consensus disorder prediction 97 112 - -
Lja4g2412 345 MobiDBLite consensus disorder prediction 168 186 - -
Lja4g2412 345 MobiDBLite consensus disorder prediction 67 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2412 Lja-Chr4 27164296 27166661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2412 19 345 IQD Protein Family AT4G23060 40.988 3.02e-52 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2412 - - gmx:100793587 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2412 4 27164296 27166661 Lja4g2412 4 27164296 27166661 PCT