Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2404 ATGGCGTCGTCGTTGCAGCACGCCACCGCTTCGATTCAAGCCATCCCCACCACCAGAAACATCCTCACCCAGAAACCCATCCTCAACCTCTCCCTCCCGAGCTCCACCTTCACCCCACTCAACCTCAAACTTGTCTCAGTCGCCCCCTCCCGCCGCTCCGGCGGCGGCGCACTCGGAGCCAGAATGAACGCCTCCGCCGCCACCAGCTACGCCTCCGCACTCGCCGACGTCGCCAGCTCCAACAAATCCCTCGACGCCACCACCGCCGACGTGGAGAAGCTCGAGACGCTCTTTTCTGACGCCAAGGTGTTCGACTATTTCTCCAACCCAACCGTCCGCATCGAAGACAAGCGCAAGCTCATCGACGACATTGCCAAGAGCTCGGAGCTTCAGCCACATACCCGGAACTTCCTCTACATCCTCATCGACTCGCAGAGGATCGACCTCATCATTGAGATCGTGAAGGAGTATGAGCTCGTGTACAACACGCTCACTGATACCGAGCTCGCGGTGGTGACCTCGGTGGTGAAGCTGGAGTCGCAGCACCTGGCGCAGATTGCCAAGCAGGTGCAGAAGCTCACTGGGTCGAAGAATGTGAGGATTAAGACCCAGCTTGACCCGAGTTTAGTGGCGGGTTTCACTGTGAGGTATGGGAATTCTGGGTCTAAGTTGATTGACATGAGTGTCAAGAAGCAATTAGAGGAAATTGCAGCTCAGCTTGAAGTGGGTGATATCTCACTTGCTGTATGA 750 0.568 MASSLQHATASIQAIPTTRNILTQKPILNLSLPSSTFTPLNLKLVSVAPSRRSGGGALGARMNASAATSYASALADVASSNKSLDATTADVEKLETLFSDAKVFDYFSNPTVRIEDKRKLIDDIAKSSELQPHTRNFLYILIDSQRIDLIIEIVKEYELVYNTLTDTELAVVTSVVKLESQHLAQIAKQVQKLTGSKNVRIKTQLDPSLVAGFTVRYGNSGSKLIDMSVKKQLEEIAAQLEVGDISLAV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2404 249 Gene3D - 66 158 IPR026015 -
Lja4g2404 249 PANTHER ATP SYNTHASE-RELATED 16 249 - -
Lja4g2404 249 Pfam ATP synthase delta (OSCP) subunit 67 240 IPR000711 GO:0015986|GO:0046933
Lja4g2404 249 PANTHER ATP SYNTHASE DELTA CHAIN 16 249 IPR000711 GO:0015986|GO:0046933
Lja4g2404 249 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 199 218 IPR020781 GO:0015986|GO:0016020|GO:0046933
Lja4g2404 249 Hamap ATP synthase subunit delta [atpD]. 62 242 IPR000711 GO:0015986|GO:0046933
Lja4g2404 249 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 165 IPR026015 -
Lja4g2404 249 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 67 240 IPR000711 GO:0015986|GO:0046933
Lja4g2404 249 PRINTS ATP synthase delta subunit signature 146 160 IPR000711 GO:0015986|GO:0046933
Lja4g2404 249 PRINTS ATP synthase delta subunit signature 66 85 IPR000711 GO:0015986|GO:0046933
Lja4g2404 249 PRINTS ATP synthase delta subunit signature 135 146 IPR000711 GO:0015986|GO:0046933
Lja4g2404 249 PRINTS ATP synthase delta subunit signature 197 212 IPR000711 GO:0015986|GO:0046933
Lja4g2404 249 PRINTS ATP synthase delta subunit signature 215 233 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2404 32 248 Primary Pumps ATPases AT4G09650 63.927 8.80e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2404 K02113 - gmx:100815063 337.421