Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2403 ATGAGAGAAACAATGTTGTCATCCATTTTTCATGTGTTATTGCCCCTTCTTCTTTTCCATTTGCTGCAGGAACCTACCCAAGCAATCAAGCAGTCCTATGTTGTATACTTAGGATCACATTCCTTTGGTTCAAATCCTACATCAATTGATGTTGAATCAGCCACAAACTCCCACTATGATTTACTTGGATCTTACGTTGGAAGCACCGAGAAGGCCAAAGAAGCAATGTTTTATTCATATAATAGATATATTAATGGCTTTGCTGCAGTACTTGATGAAGATGAAGCAGCAAATATTGCAAAACATCCGAATGTAGTGTCAGTTTTCTTAAACAGAAGACATGAACTACACACAACTCGCTCATGGGATTTTCTCGGGTTGGAGAGAGAAAATGGTAAAATTCCAAAGTCATCAATATGGCATAAATCACTCGGTGAAGATATCATTATTGGAAATTTAGACACAGGTGTTTGGCCAGAATCCAAGAGTTTTAGCGATGAAGATCTGGGGCCAATCCCAGCAAAGTGGTATGGAAAATGTGAAGTTCACGAAATGAACAAAGATAAATTTCACTGTAACAGGAAGTTAATTGGAGCAAGATATTTTTACAAAGGTTATCTAGCATCTGGTGGTTCTAAAAATGTTTCCTTTGCTAGTGCTCGTGACGTTGATGGTCATGGTTCGCATACTTTATCAACCGCTGGAGGCAACTTTGGAATAGCAAGCGGAGGGTCGCCAAAAGCTCGGGTTGCATCCTATAAGGTGTGTTGGGGTGGATGCTCTGATGCTGACATTTTGGCTGGATTTGAAGCCGCCATTGGTGATGGTGTTGATGTCCTCTCAGTGTCTTTGGGTTCAGATTCCCTTGAAACGCTCATCACCTTTGCTGAAAGTGGTATAACCATAGGGTCCTTCCATGCAACTTCCCATGGCGTCGTTGTTGTGGCCTCCGCGGGAAACTCAGGACCTATTCCATACTCTGTAACCAACCTGGAACCATGGGTGCTCACTGTTGCTGCAAGCACAATCGATAGGGAGTTCTCTAGTTATATCACTCTTGGTAACAAAAAAATCCTTAAGGGAGATAGCCTTTCTCAGTCTGGCTTACCATCTGGGAAGATGTACCCATTGGCCAGTGGGGCTGATGTCAAACTCCAGAGTGCAATTGCCACAGATGCCCTTCTTTGTAAGAATGGAACTCTTGATCCCAAGAAGGCGAAGGGGAAAATATTGATCTGCCTTCGAGGTGACACTGCTAGAGTTGAAAAGGGCTTCCAAGCTGCTCAGGCAGGCGCTGTGGGAATGATTTTGGCTAATGACAAGGCTTCCGGGAATGAAATCCTTGCTGACGCTCATGCGCTTCCTGCTTCACATGTCAACTTTAAGGATGGGAGTTACATTTTTAATTACATCAACAATACCAAGTCTCCCTTGGCTTACATTTCTCCAGTGAAAACAGAATTGGGTCTAAAGTCGTCTCCAATTGTTGCTTCATTTTCATCAAGAGGTCCAAATATTCTTGAGGAAGCAATCCTCAAGCCTGACATCACTGCACCAGGAGTTAACATTATTGCTGCTTATACCAAAGCCATATCTCCAACAGAAGAAGAATCTGATAAACGTAGAGTTTCTTTTACTACAATGTCAGGCACTTCAATGTCATGTCCTCATGTTGCTGGCATTGTTGGATTGTTAAAATCTCTTCATCCATATTGGAGTCCTGCTGCTATCAAGTCAGCAATAATGACCACAGCAACTACAAAAGATAACTCCGGAAGGAGTATACTTGACTCGTCATCCATGAAGGAGGCAACCCCATTTGCTTATGGTGCAGGGCATATTCAACCTGATCGTGCTATGGACCCGGGGCTTGTATATGACCTTGATACTTATGATCATTTGAACTTCTTGTGTTATCGTGGCTTCACCAGCTCTCAGCTTAAGGCATTCTACCAAGGATCTTACACTTGTCCGAAGTCATTCAATATAGCAAACTTCAATTATCCAGCAATCACAATTCCTAACCTTGTAGTTGGACATCCTTTGAATGCTACTCGTACTCTTACAAATGTTGGTCCCCCAAGCAATTATAAAGCATACATCAAGGCACCTCCACATGTTTTAGTTTCAGTAGAGCCTCGCAGATTGAGCTTTAAGGCACTGGGTGAAAAAGTGGAGTTCAGAGTTACATTGAACTTAACTTCGCCAATTGAGGATTATGTGTATGGAATTTTGGTTTGGACCGATGGTAAACACCATGTCAATACACCTATTACAGTCAAGATGCATTCTAAGTAG 2298 0.4234 MRETMLSSIFHVLLPLLLFHLLQEPTQAIKQSYVVYLGSHSFGSNPTSIDVESATNSHYDLLGSYVGSTEKAKEAMFYSYNRYINGFAAVLDEDEAANIAKHPNVVSVFLNRRHELHTTRSWDFLGLERENGKIPKSSIWHKSLGEDIIIGNLDTGVWPESKSFSDEDLGPIPAKWYGKCEVHEMNKDKFHCNRKLIGARYFYKGYLASGGSKNVSFASARDVDGHGSHTLSTAGGNFGIASGGSPKARVASYKVCWGGCSDADILAGFEAAIGDGVDVLSVSLGSDSLETLITFAESGITIGSFHATSHGVVVVASAGNSGPIPYSVTNLEPWVLTVAASTIDREFSSYITLGNKKILKGDSLSQSGLPSGKMYPLASGADVKLQSAIATDALLCKNGTLDPKKAKGKILICLRGDTARVEKGFQAAQAGAVGMILANDKASGNEILADAHALPASHVNFKDGSYIFNYINNTKSPLAYISPVKTELGLKSSPIVASFSSRGPNILEEAILKPDITAPGVNIIAAYTKAISPTEEESDKRRVSFTTMSGTSMSCPHVAGIVGLLKSLHPYWSPAAIKSAIMTTATTKDNSGRSILDSSSMKEATPFAYGAGHIQPDRAMDPGLVYDLDTYDHLNFLCYRGFTSSQLKAFYQGSYTCPKSFNIANFNYPAITIPNLVVGHPLNATRTLTNVGPPSNYKAYIKAPPHVLVSVEPRRLSFKALGEKVEFRVTLNLTSPIEDYVYGILVWTDGKHHVNTPITVKMHSK* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2403 765 Pfam Subtilase family 145 594 IPR000209 GO:0006508|GO:0008236
Lja4g2403 765 Pfam Fibronectin type-III domain 665 760 IPR041469 -
Lja4g2403 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 760 IPR045051 -
Lja4g2403 765 CDD PA_subtilisin_like 350 481 - -
Lja4g2403 765 Gene3D - 637 763 - -
Lja4g2403 765 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Lja4g2403 765 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Lja4g2403 765 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Lja4g2403 765 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 28 760 - -
Lja4g2403 765 Gene3D - 344 488 - -
Lja4g2403 765 Gene3D Peptidase S8/S53 domain 147 632 IPR036852 GO:0004252|GO:0006508
Lja4g2403 765 Pfam PA domain 396 466 IPR003137 -
Lja4g2403 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Lja4g2403 765 Pfam Peptidase inhibitor I9 32 117 IPR010259 -
Lja4g2403 765 ProSiteProfiles Serine proteases, subtilase domain profile. 121 620 - -
Lja4g2403 765 SUPERFAMILY PA domain 401 476 IPR046450 -
Lja4g2403 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 117 IPR037045 -
Lja4g2403 765 SUPERFAMILY Subtilisin-like 116 624 IPR036852 GO:0004252|GO:0006508
Lja4g2403 765 CDD Peptidases_S8_3 114 586 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2403 Lja-Chr4 26955306 26959700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2403 21 764 Subtilisin-like Serine Gene Family AT5G59810 56.283 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2403 - - vun:114175516 951.044