Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2402 ATGGTTCAGGGGTCGGTGTCTCGGTTTCATGCTTATTTTGCTCTTGCCTACTCTATCAAGTCCTTGGTTCAGAGATCTTGGCAGGTTGTTTTGCGTCACACTCTTCGCAAAGGGAATGCTCCAGCATCTTATATTGTGTACCTAGGATCACATTCCTTTGGTTCAAATCCCACATCAGTTGATGCTGAATCAGCCACAAACTACCACTATGATTTACTTGGATCTTACGTTGGAAGCATAGAGAAGGCAAAGGAAGCCATATTTTATTCATATAATAGATATATTAATGGCTTTGCTGCAGTACTTGATGAAGATGAAGCCGCAAATATTGCAAAGCATCCGAATGTGGTATCAGTTTTCTTAGACAAAGAACATAATTTGGCCACAACTCACTCATGGAATTTCCTTGGTATGGAGGAAAAGGGTAAAATTCCAAAGGCATCAATATGGCAAAGATCACTAGGAGAAGACATCATCATTGGAAATATAGACACAGGTGTTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGATGGGTCCAGCCCCAACCAAGTGGCATGGAAAATGTGAAGTTGACAAGAACAACAAAGACAAGTTTCACTGCAACAGGAAGTTGATTGGGGCAAAATATTTTTACAAAGGTTATCAGGCATTTGGTTTCCATGGAAAAAATGTTTCGTATGCTAGTGCTCGCGACTTTGATGGTCATGGTACACATACTTTATCAACGGCAGGAGGAAACTTTGTTTATGGAGCAAGTGTTTTTGGCAATGGAAAGGGAATCGCAAGCGGCGGGTCACCAAAAGCACGGGTTGCATCCTATAAGGTGTGTTGGAGTCCAAGTGGATGTTTTGGAACAGACATTTTGGCTGCTTTTGAAGCTGCCATTGGTGACGGCGTTGATGTGCTTTCGATGTCTATAATTTATAATGTTACAACCCCTGTCAACATTTTTGAAAGTGGTATATCCATTGGATCCTTCCATGCAGTTTCTCATGGCGTAGTTGTTGTGAGCTCTGGAGGAAACTCTGGACCTTCTCCTAATACCGTATGTAACTTGGAACCATGGATGCTCACAGTTGCTGCAAGCACAATTGATAGAGAGTTCTCGAGTGACGTCACTCTTGGAAACATGAGAATCCTTAAGGGAGAAAGCCTTTCTCAGTTTAGCTTAACATCTGGGAAGTTGTACCCATTGGTTAGTGCTGCTAATGTCAAAGCCCACAATGCATCAGACATGGATGCCATTCGTTGCAAGAATGGAACTCTTGATCCAAAGAAGTCGAAGGGGAAAATATTGGTTTGTCTTCGAGGCGATAATGCAAGAAATAACAAGGGTGTGCAAGCTGCTCATGCAGGCGCTATTGGAATGATTTTGGCTAATAACAAATCTTCAGGGAATGAAATTATTGCTGACCCTCATGTGCTCCCTGCTTCACATATAAACTTTGAGGATGGTAGTTACATTTTTAATTACATCAAGCATACAAAGTCTCCCAAGGCTTACATTTCTAGAGTGAAAACAAAGCTAGGTGTAAAACCGGCTCCAATTATGGCTGCATTTTCATCAAGGGGGCCAAATCTTCTTGAGGAAGCAATTCTCAAGCCTGACATAACCGCACCAGGAGTTAACATCGTCGCTGCTTATAGTGAAGCTGCATCTCCAACAGAAGAAACATCTGATGAACGCAAGATTCCTTTCACTTCAATGTCAGGCACTTCAATGTCGTGTCCTCATGTTTCTGGCATTGTTGGGTTGCTTAAATCTCTTCATCCGAATTGGAGTCCTGCTGCTATCAAGTCAGCAATAATGACTACAGCAAGTACGAAAGATAAGTACGGAAGGCCTATTCTGAATTCATCAATGAATGAGGCAACTCCATTTGATTATGGTGCAGGGCACATTCAACCTAATCGTGCCATGGACCCAGGACTTGTATATGACCTTAACATTTATGATTATTTGAACTTCTTATGTGTTCGTGGCCATACCAGTTCCCAACTTAAGGTGTTCTACCCCAAGCCTTACACATGTCCAAAATCATTCAATATAGCAACAGATTTCAACTATCCAGCAATCACGATTCCTAACCTTCTCTTTGGACACTCAGTTAATGTTACTCGTACTCTTACCAATGTTGGGTCCCCAAACAAGTATAGAGTGCACATCAAGGCACCTCCACATGTTTTAGTTTCAGTTGAGCCTCGCAGATTAAGCTTTAAAGAAAAGGGTGAAAAAAAGGAGTTTAGAGTTACATTGACCTTAACGTCACCAATTAAGGATTATGTCTTTGGAAGGTTGGTTTGGAAAGATGGTAAACACCATGTAAATACACCTATTACAGTTAAGATGACTACTAAGCTTCCACACTAG 2376 0.415 MVQGSVSRFHAYFALAYSIKSLVQRSWQVVLRHTLRKGNAPASYIVYLGSHSFGSNPTSVDAESATNYHYDLLGSYVGSIEKAKEAIFYSYNRYINGFAAVLDEDEAANIAKHPNVVSVFLDKEHNLATTHSWNFLGMEEKGKIPKASIWQRSLGEDIIIGNIDTGVWPESKSFSDEGMGPAPTKWHGKCEVDKNNKDKFHCNRKLIGAKYFYKGYQAFGFHGKNVSYASARDFDGHGTHTLSTAGGNFVYGASVFGNGKGIASGGSPKARVASYKVCWSPSGCFGTDILAAFEAAIGDGVDVLSMSIIYNVTTPVNIFESGISIGSFHAVSHGVVVVSSGGNSGPSPNTVCNLEPWMLTVAASTIDREFSSDVTLGNMRILKGESLSQFSLTSGKLYPLVSAANVKAHNASDMDAIRCKNGTLDPKKSKGKILVCLRGDNARNNKGVQAAHAGAIGMILANNKSSGNEIIADPHVLPASHINFEDGSYIFNYIKHTKSPKAYISRVKTKLGVKPAPIMAAFSSRGPNLLEEAILKPDITAPGVNIVAAYSEAASPTEETSDERKIPFTSMSGTSMSCPHVSGIVGLLKSLHPNWSPAAIKSAIMTTASTKDKYGRPILNSSMNEATPFDYGAGHIQPNRAMDPGLVYDLNIYDYLNFLCVRGHTSSQLKVFYPKPYTCPKSFNIATDFNYPAITIPNLLFGHSVNVTRTLTNVGSPNKYRVHIKAPPHVLVSVEPRRLSFKEKGEKKEFRVTLTLTSPIKDYVFGRLVWKDGKHHVNTPITVKMTTKLPH* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2402 791 CDD Peptidases_S8_3 125 609 IPR034197 -
Lja4g2402 791 ProSitePatterns Serine proteases, subtilase family, serine active site. 573 583 IPR023828 -
Lja4g2402 791 Pfam PA domain 415 489 IPR003137 -
Lja4g2402 791 ProSiteProfiles Serine proteases, subtilase domain profile. 132 642 - -
Lja4g2402 791 Gene3D - 659 786 - -
Lja4g2402 791 Pfam Fibronectin type-III domain 688 783 IPR041469 -
Lja4g2402 791 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 128 IPR037045 -
Lja4g2402 791 Gene3D Peptidase S8/S53 domain 157 655 IPR036852 GO:0004252|GO:0006508
Lja4g2402 791 SUPERFAMILY Subtilisin-like 128 646 IPR036852 GO:0004252|GO:0006508
Lja4g2402 791 CDD PA_subtilisin_like 373 504 - -
Lja4g2402 791 SUPERFAMILY PA domain 415 497 IPR046450 -
Lja4g2402 791 Pfam Subtilase family 155 618 IPR000209 GO:0006508|GO:0008236
Lja4g2402 791 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Lja4g2402 791 PRINTS Subtilisin serine protease family (S8) signature 155 174 IPR015500 -
Lja4g2402 791 PRINTS Subtilisin serine protease family (S8) signature 572 588 IPR015500 -
Lja4g2402 791 Gene3D - 367 511 - -
Lja4g2402 791 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 783 IPR045051 -
Lja4g2402 791 Pfam Peptidase inhibitor I9 43 126 IPR010259 -
Lja4g2402 791 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 39 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2402 Lja-Chr4 26912092 26916257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2402 43 787 Subtilisin-like Serine Gene Family AT5G59810 56.591 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2402 - - vun:114175516 970.689