Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2378 ATGTCCCCTCCTCTTTATAGTGTCCTTCTTGAAGATGAAAATTCAGTGTTTCTTCTTGATCTTGATCTCTCCTCCCCAATGGGTTTCCATGCCTATCCTCATCTACCTATTTTGGATAGCAGTATTGCCAATTGGTCCCTACCCTTTTCAATTTCCGATGAAACCTTTAGGGAGAGCAAGAAGCTGAAGAGAACCATGATCCCCATTTCCTCTGCAGATTTCAGCATCTCCTCATCAAGCAGTCTGAGTGTGAGTGTGAATAGCATTCCAAGGCTCAATTTCAGAGACCACATAAGGACTTATAAGAGATACCTTGCTGCTGAAGAGTTACCAGAAGATACCAATAGTTCTGAAAGTGTTGTTGGAGCTGAAGAAGATGGTTGTGCTGATGGAATGAGGCTTGTTCAGCTCCTAATCGCTTGCGCAGAAGCGGTGGCTTGTCGCGACAAGGCACATGCTTCTATGTTGCTATCTGAGCTTAAATCCAATGCCTTGGTGTTTGGATCATCATTCCAGAGAGTTGCTTCTTGCTTTGTGCAAGGCTTAGCAGAGAGGCTAACTCTGATTCAGCCAATTGGAAGTGGTGCAGGAGTTTCACAATCCATGATGAACATCATGGATGCAGCCTCAGAAGAAATGGAAGAAGCATACAGGTTGGTTTATGAGACATGCCCACACATTCAATTTGGACACTTTGTGGCTAATTCCACTATATTGGAAGCCTTTGAGGGTGAGAGTTTTGTCCATGTAGTGGACCTAGGCATGAGCCTCGGTCTACCTCATGGACACCAGTGGCGGGGACTGATCCACAGCCTCGCTAATCGTGCCAGCGGACACGGTCGTGTTCGCCGGCTCAGAATCACAGCGATTGGACTATGCATTGCCAGACTCCAGGCCATTGGTGATGAACTCTCGGATTACGCAAACAATTTGGGCATTAACTTGGAATTCTCCGTGGTGCAGAAGAATTTGGAAAATTTGCAACCTGAAGACATCAAGGTGAATGATGATGAAGCTCTTGTTGTCAATAGCATTCTGCAGCTGCATTGTGTGGTTAAGGAGAGTCGTGGCGCTTTGAATTCGGTGCTTCAGATGATTCATGGGCTCTCACCAAAGGTTTTGGTGATGGTGGAGCAGGATTCAAGTCACAATGGACCTTTTTTTCTTGGGAGGTTTATGGAATCACTACACTATTATTCTGCTATCTTTGACTCATTGGATGCTATGTTGCCAAAGTATGACACTAAGAGGGCAAAGATGGAGCAGTTTTACTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAGGGGCCATTGAGGATGGAGAGGCATGAGAGGGTGGATCAGTGGAGGAGGAGGATGAGCAGGGCTGGGTTTCAGGCTGCACCTATCAAGATGGTGGCTCAGGCTAAGCAGTGGCTTCTCAAGAACAAGATTTGTGATGGATACACTGTTGTGGAGGAGAAAGGGTGCTTGGTGCTTGGGTGGAAGTCAAAGCCTATTGTTGCAGCTTCTTGCTGGAAATGTTAA 1530 0.4614 MSPPLYSVLLEDENSVFLLDLDLSSPMGFHAYPHLPILDSSIANWSLPFSISDETFRESKKLKRTMIPISSADFSISSSSSLSVSVNSIPRLNFRDHIRTYKRYLAAEELPEDTNSSESVVGAEEDGCADGMRLVQLLIACAEAVACRDKAHASMLLSELKSNALVFGSSFQRVASCFVQGLAERLTLIQPIGSGAGVSQSMMNIMDAASEEMEEAYRLVYETCPHIQFGHFVANSTILEAFEGESFVHVVDLGMSLGLPHGHQWRGLIHSLANRASGHGRVRRLRITAIGLCIARLQAIGDELSDYANNLGINLEFSVVQKNLENLQPEDIKVNDDEALVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSSHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQAKQWLLKNKICDGYTVVEEKGCLVLGWKSKPIVAASCWKC* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2378 509 ProSiteProfiles GRAS family profile. 125 508 IPR005202 -
Lja4g2378 509 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 508 IPR005202 -
Lja4g2378 509 PANTHER DELLA PROTEIN RGL1-LIKE 36 508 - -
Lja4g2378 509 Pfam GRAS domain family 134 508 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2378 Lja-Chr4 26594006 26595586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2378 126 508 GRAS Transcription Factor Family AT1G66350 37.209 1.52e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lja4g2378 GRAS 6.6e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2378 - - gmx:100813548 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2378 4 26594006 26595586 Lja4g2378 4 26594006 26595586 ECH