Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2371 ATGAAGAAGCTCACTGCAATTGTTTCAACTTTCTCGATCTTAATACTTTGTTTTCAAATGCTCCTCCATGTTCATTCGATACCTCTCTTATTAGGAAACCAGGTTGATGAGGAATCTTCTGGTCGAAGGAATCTTAAACAGGAACCGGAGCATACTCGTGAAGTGCATTGCTCTAGAGAGAGAAGTAGGGTAGCATCGAAAGTAATAGAGGAGTATTTGACACCATTTGTGGAAAAAGAAAACTATCAGCTTTCAAGAAAGTGCAGACTTCACCCTGAGAATGATATGTTCAGGGATCAAGAAGAGAATAAAATTTACATAGACTATCATGAGTGGCGATGTGGATATTGTAAGAAAAGCTTCCGTGAGGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTACAATCTTCTGAATGCAAGTGATGGGAAGTGCTTGGCTGGTTTGTGTGGGGCATTGCATTGTGATGCTGTAATGAATTCCAAGTCCTCTAGATGCAAGTGTAATCCAGCAGCTGCTGCAAGAAACCTTCACCTATGTGAGAGTCTTGCTGACAGTTGTTTTCCTATAAGCGAGGGTCCATCAGCAAGCCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACCTGCTCAGGGAAACATAAACCGTTCTCTAGAGGAGGCAAGGTTCAAGTAAGTTTCTTCCGCCTAGCTGCTGGAGCATTGATCTTAGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGGTTCAAAGTGATATGAAGAGTCGAACTCAAGAGCTTCGTCGCATCCCAAAAAGAGGGAAAGCAAAGCCATCATGA 834 0.4149 MKKLTAIVSTFSILILCFQMLLHVHSIPLLLGNQVDEESSGRRNLKQEPEHTREVHCSRERSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEENKIYIDYHEWRCGYCKKSFREEKFLDQHFDNRHYNLLNASDGKCLAGLCGALHCDAVMNSKSSRCKCNPAAAARNLHLCESLADSCFPISEGPSASRLHELFLHQFCDAHTCSGKHKPFSRGGKVQVSFFRLAAGALILVLLPVFYLFLYLVQSDMKSRTQELRRIPKRGKAKPS* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2371 277 ProSitePatterns Zinc finger C2H2 type domain signature. 114 135 IPR013087 -
Lja4g2371 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 135 IPR013087 -
Lja4g2371 277 PANTHER ZINC FINGER PROTEIN-RELATED 11 275 - -
Lja4g2371 277 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2371 Lja-Chr4 26536044 26540467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2371 37 277 C2H2 Transcription Factor Family AT5G63280 61.475 1.35e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2371 - - gmx:100780668 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2371 4 26536044 26540467 Lja4g2371 4 26536044 26540467 ECH