Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2368 ATGGCGGGGAAGGTGTCGAAGGCAGCTTACGATTCGAAGATGTGTAAGCTTCTTCGAGAGTACAGCCAGGTGCTGGTGGTTTCCGCAGACAATGTTGGGTCGAACCAGCTTCAGGGGATACGGAGGGCACTCCACGGTGATTCGGTGGTGGTGATGGGAAAGAACTCGTTGATGAAACGTTCTATCATTGACGATGCAGAGAAAACAGGCAACAAGGCCTTCCTTAACCTTGTTCCCCTCCTCGTCGGGAACGTGGCTTTGATTTTCACCAAAGGTGACTTAAGGGAGGTCAGCGAACAGGTTGCAAAGTACAAGGTTGTTGATCCTATTCTCATGTGCCCTAAGTACATGACCTACGACTCATACCGCACTTGTTCCTATTTGCAATCTGGACAATTACCGCTAGGCCTCACTTGTTGTAACCAGCAATCTGCACAGACTTCCGAGCCTTTTCTAGTATGCTCAAAATTTTTGCCGCACCAGCATTGTCATTTGATGAGATCAAGACAGTTTTTGATGACCAGTATATGGGCTCCTTTTCTCCTTTTGGCTGGTAACTTGTGA 564 0.4787 MAGKVSKAAYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNSLMKRSIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDPILMCPKYMTYDSYRTCSYLQSGQLPLGLTCCNQQSAQTSEPFLVCSKFLPHQHCHLMRSRQFLMTSIWAPFLLLAGNL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2368 187 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 186 - -
Lja4g2368 187 Pfam Ribosomal protein L10 6 104 IPR001790 -
Lja4g2368 187 SUPERFAMILY Ribosomal protein L10-like 7 104 IPR043141 -
Lja4g2368 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 186 - -
Lja4g2368 187 Gene3D - 4 124 IPR043141 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2368 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 51.765 1.08e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2368 K02941 - mnt:21409050 161.77