Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2361 ATGGATCCCCAAAGCGAACAAACCACCCGGGTCGAACCCGAACCCGATATCTTCATCCACACCTCCGATGGAACCCGCATTCCAGCACACTCAAACATTCTGGCTTCTATGTCACCGGTTTTGGAAAGTATGATAGACCGGCCGCGAAAACACCGGAGCTCCGAACGAATAATCCAAATCCACGGCGTCCCCGGCGACGCCGTAACCGCATTCCTCACCTTCCTCTACTCCCGGCGCTGCACGGAGGACGAGATGGATCGCTACGGCATGCACCTGCTTGCTCTCTCGCACGTCTACATGGTGCCGCACCTCAAACAGAGATGCACGAAAGGCCTATCGCAGCGCGTGAACACAGAAAACGTGGTGGACATGCTCCAACTGGCGCGTCTCTGCGACGCGCCGGATCTCCACCTCCGCTGCATGAACCACCTCACAAGAAACTTCAAAACGGTGGAGGAAACCGAAGGGTGGAGGTTTTTGACGAAACACGATCCGTGGTTGGAACTCGAGGTGCTGCGGTTCATGGACGAGAGCGAGACGAGGAGGGAGAAGTCGCGGCGGAGCAGGGAGGTGCAGGGGCTGTACGCGCAGCTGAGCGAGGCGATGGAGTGTTTGGATCACATTTGCACGGAAGGGTGCACCCTTGTGGGGCCACACCATGTGGAGGTTGATAGAAAGAGTGGGCCATGTAACAAGTTCGCCACGTGTCAGGGTGTGCAGCAGTTGATTCGGCACTATGCCACGTGTACGAAGAGGATGGGTGGTGGGTGCTTGCGGTGCAAGCGAATGTGGCAGCTTTTCCGCCTCCATTCCTATGGTTGTGAACACGCTGATTCCTGCAACGTTCCTCTTTGCAGGCAATTTCAATACAGAATGCAGACAGAGAAAATGAAAAATGATGAAAGGTGGAGACTACTAGCGAGGAAAGTGGCCTCAGCCAAAATCATGTTTTCCTTGTCTCTTTCAAAAAGGAAGCGGAATGAGGAAACCAGAGTGTCGATGAACAATCCAGGGATCAGAAGCTTCAAATTACAATGA 1038 0.5414 MDPQSEQTTRVEPEPDIFIHTSDGTRIPAHSNILASMSPVLESMIDRPRKHRSSERIIQIHGVPGDAVTAFLTFLYSRRCTEDEMDRYGMHLLALSHVYMVPHLKQRCTKGLSQRVNTENVVDMLQLARLCDAPDLHLRCMNHLTRNFKTVEETEGWRFLTKHDPWLELEVLRFMDESETRREKSRRSREVQGLYAQLSEAMECLDHICTEGCTLVGPHHVEVDRKSGPCNKFATCQGVQQLIRHYATCTKRMGGGCLRCKRMWQLFRLHSYGCEHADSCNVPLCRQFQYRMQTEKMKNDERWRLLARKVASAKIMFSLSLSKRKRNEETRVSMNNPGIRSFKLQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2361 345 ProSiteProfiles BTB domain profile. 15 84 IPR000210 GO:0005515
Lja4g2361 345 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 6 343 - -
Lja4g2361 345 CDD BACK 117 164 - -
Lja4g2361 345 Pfam TAZ zinc finger 199 285 IPR000197 -
Lja4g2361 345 Gene3D TAZ domain 188 313 IPR035898 -
Lja4g2361 345 SMART TAZ_2 192 286 IPR000197 -
Lja4g2361 345 SMART BTB_4 15 116 IPR000210 GO:0005515
Lja4g2361 345 SUPERFAMILY TAZ domain 191 289 IPR035898 -
Lja4g2361 345 SUPERFAMILY POZ domain 16 114 IPR011333 -
Lja4g2361 345 Gene3D Potassium Channel Kv1.1; Chain A 6 116 IPR011333 -
Lja4g2361 345 Pfam BTB/POZ domain 15 114 IPR000210 GO:0005515
Lja4g2361 345 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 6 343 IPR044513 -
Lja4g2361 345 Gene3D - 117 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2361 Lja-Chr4 26109565 26113506 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lja4g2361 BTB 1.4e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2361 - - cam:101496955 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2361 4 26109565 26113506 Lja4g2361 4 26109565 26113506 ECH