Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2348 ATGCTACTCATACTCTTACCCATCTTCCTCATCTTGTTTCTGCAAACTATCAAATGGTATTCCAACTCCACAAAACGCAAAACCTCACCCCCTTCTCCTCCAAAGCTCCCAGTAATAGGAAACCTCCACCAACTCGGCCTATTCCCTCACCGCACACTCCAATCTTTAGCAAGAAAGCATGGCCCTGTGATGCTGCTCCACCTAGGAAGCGTGCCGGTTCTCGTGATCTCATCCGCGGAAGCCGCGTGCGAGATAATGAAAACGCACGACCGCGTCTTCGCGAACAGACCACACGGGAAGTTGTACGACATACTCTTGTATGATTCCAAAGATGTTTCCACAGCTCCTTATGGAGAATACTGGAGGCAGATAAGGAGCATCTCCGTCTTGCACCTTCTCAGTGTGAAGAGGGTTCGATCTCTTCGCTGTGTGAGAGAAGAGGAGATCATGTTGATGATGGAGAAAATAAGAAACTCTTGCTCCTCGGCCTCACCGGTGAATTTAAGTGGACTAATCGCTAGGACGATCAATGATATAGTTTGCAGGGTGGCGTTGGGAAGAAAGTATGGTGGAGAAAGTGGGAAGGGGTTCAAGAAGTTGCTGGAGGAGTTCACTGAGCTGCTTGGTTCGTTTATTGTTGGGGATTATGTGCCTTGGCTTGGCTGGTTGACATGGATTTCTGGTGTATATGCAAAAGCAAACAGAGTGGCGAAAGAGTTTGATGATCTTTTGGAGGAAGTGGTTGAAGAACACATCAATCGGGAGAAAGGAGCCAGCAATAAGAAGGATGTTCGTTCAGATAGTGAAGGCCAAAGTGATTTTGTTGACGTTTTGCTTTGGATCCAAAGGACAAACGCTCTTGGATTTTCTATTGACAGAACTGTCATCAAGGCTTTGATATTGGATATGTTTTCTGCAGGTACAGACACTATATCTACCTTGTTGGAGTGGGAAATGACAGAACTCTTAAGGCATCCACTTGTCATGAAGAAACTGAAAGATGAGGGGAAGAATGTAGCCGGTGATAGAGTGCACATAACTGAAGAGGATTTGGATCAAATGCCATACTTAATGGCGGTGGTTAAGGAAACATTGCGCTTACACCCGCCAATTCCATTACTTGTTCCGCGAGAAAGCAGCCAGGACATTCAGCTGAAGGGCTACCAGGTAAAAGCGGGCACGCGAGTATTCATCAATGCTTGGGCCATTGCAAGGGATCCTGCATACTGGGAAGAACCTGAAGAGTTCAAACCTGAGAGGTTCTTGAACAGCTCAGTGGATGTCAAAGGGAATGATTTCCACTTGATTCCTTTTGGAGCAGGGAGGAGGGGTTGTCCAGGGATAGCATATGCTATGGTTGCTAATGAGATTGTGCTAGCTAACCTTATTCACCAATTTGATTGGGAAATACCAAGTGGATTTGCAGGGGAGAAAACATTGGACTTGTCTGAAACAGTTGGGTTAACTATGCATAGAAAGAGTCCCCTAATGGCAGTTGCAACCACAAAAAAGAAGTAA 1518 0.4592 MLLILLPIFLILFLQTIKWYSNSTKRKTSPPSPPKLPVIGNLHQLGLFPHRTLQSLARKHGPVMLLHLGSVPVLVISSAEAACEIMKTHDRVFANRPHGKLYDILLYDSKDVSTAPYGEYWRQIRSISVLHLLSVKRVRSLRCVREEEIMLMMEKIRNSCSSASPVNLSGLIARTINDIVCRVALGRKYGGESGKGFKKLLEEFTELLGSFIVGDYVPWLGWLTWISGVYAKANRVAKEFDDLLEEVVEEHINREKGASNKKDVRSDSEGQSDFVDVLLWIQRTNALGFSIDRTVIKALILDMFSAGTDTISTLLEWEMTELLRHPLVMKKLKDEGKNVAGDRVHITEEDLDQMPYLMAVVKETLRLHPPIPLLVPRESSQDIQLKGYQVKAGTRVFINAWAIARDPAYWEEPEEFKPERFLNSSVDVKGNDFHLIPFGAGRRGCPGIAYAMVANEIVLANLIHQFDWEIPSGFAGEKTLDLSETVGLTMHRKSPLMAVATTKKK* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2348 505 SUPERFAMILY Cytochrome P450 30 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 Pfam Cytochrome P450 30 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Lja4g2348 505 PANTHER CYTOCHROME P450 71B11-RELATED 4 504 - -
Lja4g2348 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 504 - -
Lja4g2348 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2348 505 Gene3D Cytochrome P450 16 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2348 Lja-Chr4 25944265 25948180 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2348 25 502 Cytochrome P450 AT3G48270 53.445 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2348 - - gmx:100806940 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2348 4 25944265 25948180 Lja4g2348 4 25944265 25948180 ECH