Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2345 ATGCTATATATATGTTTGTGGACTCTCTCCTTACCAGATGAGGTTGTGAAAACTGAAATAAAAATGGCTCTCAAACAATGGCCATATTATGATGAGCAAATAAAATCTGTGTTCTTTTCTCCTTTCTATCTGTCTCTGTTCTTCTTTACCACTGTTCTGTTCATGTTGAAGCTTGCAAAAAGAACCAAAACCCGTCTAAATCTCCCTCCATCTCCACCAAAGCTACCAATCATCGGCAATCTCCATCAGCTAGGCGAACTCCCCCACCACTCTTTCAGAAAACTCTCACGCAAATACGGCGACATGATGATGTTGCAGCTGGGGCAGAGGAAAACACCAACCTTGGTGGTTTCATCTGCAGATGTGGTCATGGAAATGATGAAGAATCATGACTTGGCGTTATCAAACCGACCCCAGATGACACCTGCGAAAATCTTACTCTATGGTTGCAAAGATGTCGGTTTTGGACACTATGGAGAGGATTGGAGACAGAAAAGGAGAATTTGCGTGAGTGAACTTCTGAGCCCGAAAAGGGTAGCTTCACTTCATGCCATTAGAGAAGAAGAAGCTGGAGAATTGGTGAGTAAGCTTCGTGAAGCGAGCTTGAAAGATGCAACTGTGAATCTGAGTGAGATGATAATTTCAACATTGGGCAACATCGTTTGTCAGTGTACTCTGGGAAGGAAATACACAGGAGAAGAAAGCAGGGTGAACGTGTTAGCAAGGCATGTTATGATTCATATTATGTCTTTCACTGTGGGTGATTACTTTCCTTTGTTTGGTTGGGTTGATGTTCTCAGAGGGAAAATTCGGGAATACAAGGACACTTTTGCAGAATTGGATGGGTTGTTTGATCAAGTAATTGCAGAGCATTTGACAGAGAAACGGGAAAAACTGGGAAAAGACTTTGTGGATATTCTACTCAAAATTCAAGAGGAGAGTGTGCTTGATCAGTTTGAGTTCACCAAAACTGACCTCAAATCGCTTCTAATGGATATGTTTGTTGGAGCTATTGACACAACCGCAGCAGCATTAGAATGGGCTATGTCAGAGCTAGTGAGACATCCAAACATAATGAAGAAAGCTCAGGAAGAAGTCAGAAAAGTTGTAGGCCCAAAATCAAAAATAGAAGAAAATGATGTTAATCAATTGCACTATTTAAAGTGTGTACTCAAAGAGACTTTGAGGTTTCATCCACCTACTCCTCTTTTGGCTCCTAGAGAAACAATATCTCAAGTGAAACTGAAAGGATATGACATTCCTGCAAAAACAATGGTCTATATCAATGGCTGGGCGATTCAAAGGGATCCTGAATTTTGGGAAAACCCAGAAGAATTCATACCTGAGAGATTTGATCAGAACACCGAAATTGATATTAATATTCAAGACTTTCACTTTCTTACATTTGGTTTTGGGAGAAGGGGGTGTCCTGGAATGAATTTTGGAGTAGTTTCTGTTGAGTATTTGCTTGCTAATCTTCTTTATTGGTTTGATTGGAAGCTTCCTGAAGCAGATAATGGACATACACAAGACATTGATATGAGTGAGGTATTTGGACTTGTTGTCTCAAGGAAAGTACCACTTCATGTTAAACCAATAGCTTTTTCACTTTCATCTGCTTCTTAA 1626 0.4022 MLYICLWTLSLPDEVVKTEIKMALKQWPYYDEQIKSVFFSPFYLSLFFFTTVLFMLKLAKRTKTRLNLPPSPPKLPIIGNLHQLGELPHHSFRKLSRKYGDMMMLQLGQRKTPTLVVSSADVVMEMMKNHDLALSNRPQMTPAKILLYGCKDVGFGHYGEDWRQKRRICVSELLSPKRVASLHAIREEEAGELVSKLREASLKDATVNLSEMIISTLGNIVCQCTLGRKYTGEESRVNVLARHVMIHIMSFTVGDYFPLFGWVDVLRGKIREYKDTFAELDGLFDQVIAEHLTEKREKLGKDFVDILLKIQEESVLDQFEFTKTDLKSLLMDMFVGAIDTTAAALEWAMSELVRHPNIMKKAQEEVRKVVGPKSKIEENDVNQLHYLKCVLKETLRFHPPTPLLAPRETISQVKLKGYDIPAKTMVYINGWAIQRDPEFWENPEEFIPERFDQNTEIDINIQDFHFLTFGFGRRGCPGMNFGVVSVEYLLANLLYWFDWKLPEADNGHTQDIDMSEVFGLVVSRKVPLHVKPIAFSLSSAS* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2345 541 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 35 535 - -
Lja4g2345 541 SUPERFAMILY Cytochrome P450 69 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Lja4g2345 541 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 PANTHER CYTOCHROME P450 71B11-RELATED 35 535 - -
Lja4g2345 541 Pfam Cytochrome P450 69 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2345 541 Gene3D Cytochrome P450 54 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2345 Lja-Chr4 25899491 25903480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2345 69 532 Cytochrome P450 AT3G26330 44.563 6.99e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2345 K20617 - gmx:100803922 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2345 4 25899491 25903480 Lja4g2345 4 25899491 25903480 ECH