Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2327 ATGATGTCTGTCACCTTCATCCTCATCCTCACTCTTTTCACTTCCCAAGCAGTGGCTGATTGTGCAATACAAAAAGTAGACAAATGCCACAACAAGGAAAAAGCTCTGCCTCTCAAAATCATAGCTATCTTCGCCATCTTTGTTGCTAGCATCCTTGGTGTGTGCCTGCCCTTGGCGACGCATTCAATCCCTGCTCTTGGCCCTGAAAGCAATTTCTTCATAATCGTCAAGAGTTTCACAGCTGGAATTATTCTCGGGACCGGGTTCCTTCATGTTCTTCCTGAAGCATATGACCAGCTCTGGTCTGAATGCTTGCCAGAGAAACCATGGCATGAGTATCCATTTCCTGGGCTCGTGGCTATGTTTTCTGCAATAATTACCATGATGGTGGATTCTTTGGCTACTAGCTTTTGTTTCAAAAAGCATAGAAGACCTGAAGATATTCCACATCAGGACCATCATGAAGGTGGAGATCAAGAGATGGGTAGTGTTGTTAATTTTGGGCATCCCCGTCATCGACCCCATCAAGAGATCAATGCATCAAACAAGGAGTCCCAACTTATGCATTTTCGTGTAGTCGCCTCGGTTTTAGAACTTGGAATTGTTGTTCATGCAGTGGTGGTAGGACTTTCCATGGGAGCCTCAGACAATACATGCACAATAAAAAGTCTCGTGGCCGCCATGTGCTTCCATCAACTGTTTGAAGGCATGGGGCTTGGTGGATGCATTCTCCGGGCTGAGTACAGTATGATGAAGGTAGCAATCTATAACAGTCGAGGTGCACTCATTACTGTGGGATTGCTTAATTCAGCATCTGCTGGTATTTTAGTCTACATGTCTTTGGTTGTCCTGCTTGCTACCGATTTTATGAGTCCAAGGTTGCAGGGGTGCATTAGGCTTCAATTAAAATCTTACGTGGCAGTCTATTTGGGTGCAGGTGCCATCACTCACTCTATTAAGAGAAAGTCTTCATGGACACAAACCCACCCACATTATTCTTAG 1002 0.4491 MMSVTFILILTLFTSQAVADCAIQKVDKCHNKEKALPLKIIAIFAIFVASILGVCLPLATHSIPALGPESNFFIIVKSFTAGIILGTGFLHVLPEAYDQLWSECLPEKPWHEYPFPGLVAMFSAIITMMVDSLATSFCFKKHRRPEDIPHQDHHEGGDQEMGSVVNFGHPRHRPHQEINASNKESQLMHFRVVASVLELGIVVHAVVVGLSMGASDNTCTIKSLVAAMCFHQLFEGMGLGGCILRAEYSMMKVAIYNSRGALITVGLLNSASAGILVYMSLVVLLATDFMSPRLQGCIRLQLKSYVAVYLGAGAITHSIKRKSSWTQTHPHYS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2327 333 Pfam ZIP Zinc transporter 38 315 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja4g2327 333 PANTHER ZINC TRANSPORTER 10-RELATED 257 316 - -
Lja4g2327 333 PANTHER ZINC TRANSPORTER 10-RELATED 11 255 - -
Lja4g2327 333 PANTHER ZINC/IRON TRANSPORTER 11 255 - -
Lja4g2327 333 PANTHER ZINC/IRON TRANSPORTER 257 316 - -
Lja4g2327 333 TIGRFAM zip: ZIP zinc/iron transport family 21 255 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2327 Lja-Chr4 25763873 25766282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2327 15 316 Inorganic Solute Cotransporters AT1G31260 49.699 4.05e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2327 K14709 - gmx:100795511 391.734