Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2326 ATGTTTTCAACGGTCAACGAACTCTTGAACCAAACCATTTATGGGCTTACCCCACACTTTTTCAACTACCCATTCCAAATGGACCAACCGTCGCCGATTAACTCATTTTCCGACATGGCCACCTCACGGTTCCGATTCCGGTTCCTCTTTCTCCTCCAGCTCCAACTCCTCCTCTCTCCGACGCTCTCCCTTGATTTCATCTTCAACTCCTTCACCGGCGCCGCCACCAACCTCACCCTCATCAACGACGCCCGCGTCGACGCCACCGTGATCCGCATGACCAACGACTCCAACCAATACTCCTTCGGCCGCGCTTTCTACCCGACCAAAATCCCCATGAAACCGCCGCGAAAACCCATTTCTTCATTCTCCACTTCCTTCATCTTCTCCATCTTGCCACAGATCGCTACCAGTCCTGGCTTCGGCCTCGCCTTCCTCCTCTGCAACACCACCTCCCCTCCCGGCGCACTCGCTAGCCAGTACTTCGGACTTTTTAACAACGCCACCACGCCCACCCAGTTCCCTCTCTTCGCCGTCGAGTTTGACACCGGCCAGAACCCTGAGTTCAACGACATCAACGACAACCACATCGGAATCGACCTCAACAACGTCGAGTCCGTAAACTCAACCTCCGCCGGGTACTTCAATTCCACCGGCGGCTTCGTCTCTGTCCGTATGCGCACTGGCCAGAACGTTCGCGCCTGGATCGAGTTCGACGGCGGAAATCTGGAGGTGAACGTCACGGTGGCGCCGATCGGTGTTTCGCGCCCTTCAAGGCCCACGTTTTCGTACAGAAACCCAGAGATAGCTAACTACTTGTCTTCCGATATGTACGTCGGGTTTTCCGCTTCGAAGACCAATTGGATCGAGGCACAGAGGGTTCTGGCATGGAGCTTCAGTGATTCAGGGGTTGCTAGAGAGCTCAACACGACCAATTTGCCGGTGTTTCTGCCTGCATCATCGTCGTCTTCCTCGCTTTCCGACGGGGCTGTTGGAGGAATTGTGGTGGGTTGTTTTGTGTTTCTGGCGGTTTTGGCAACTGGGGTTTACTTGTGGTGGTGGAAGAGCAGAGGGAAAGGGTATGGAGAAGATGAAGTGGAAGATTGGGAGCTTGAGTACTGGCCCCACAGGTTCACCTATGAGGAACTGAGTGTGGCAACAGGGGAGTTCCGGAAGGACCATCTTCTGGGTTCTGGAGGGTTTGGAAGAGTGTACAAAGGGACACTGTTGAACCAGACGGAGGTGGCGGTGAAGTGCGTCAGCCACGATTCCAAGCAGGGGCTAAGGGAGTTTATGGCGGAGATTGCGAGTATGGGGAGGCTGCAGCACAAGAATTTGGTCCAAATGCGAGGGTGGTGCAGAAAGGGGAATGAACTCATGCTGGTTTATGATTACATGCCTAATGGAAGCCTCAACAAGTGGATCTTCGACCAGCCTGAGAAGCTTCTAAGGTGGGAGTACCGCCGTCGTGTCCTCGTTGATGTGGCGGAGGGGCTGAACTACCTTCACCATGGTTGGGACCAGGTTGTGATTCATAGGGATATCAAATCCAGTAACATATTGTTGGATGCTGACATGAGAGGAAGGCTAGGTGACTTTGGTTTGGCCAAGCTTTACCAGCACGGGGAGGTTCCGAACACGACGCGTGTGGTGGGGACGTTAGGGTATTTGGCGCCGGAGATAGCAAATGTAGCTGCACCAACCTCTGCCAGCGACGTGTACAGTTTTGGGGTGGTGTTGCTGGAGGTGGCGTGTGGGCGGAGGCCGTTGGAGACATCGGTGCCGGAGGAGGAGGTGGTGCTGGTTGATATGGTGAGGGAGTTGTATGCTAGAGGGAGTGTCATTGAGGCTGCGGATTCTAGGATTCAGGGGGAGTATGATGTGGGGGACATGGAGATGGTATTGAAGCTTGGGTTAGCTTGTTGCCACCCTGAGCCACACAGAAGGCCAACCATGAAGGAAGTGGTGGCGCTGCTTCTCGGGGAGGATTTAGCAGAGGCGCCGGGAAAGGTGTTGTCTGAATTGGCTCGCAGCGAGGAACCGGAAGAGGAGGCGGCCCCTTTGCAACCTTCCACTTAG 2079 0.5474 MFSTVNELLNQTIYGLTPHFFNYPFQMDQPSPINSFSDMATSRFRFRFLFLLQLQLLLSPTLSLDFIFNSFTGAATNLTLINDARVDATVIRMTNDSNQYSFGRAFYPTKIPMKPPRKPISSFSTSFIFSILPQIATSPGFGLAFLLCNTTSPPGALASQYFGLFNNATTPTQFPLFAVEFDTGQNPEFNDINDNHIGIDLNNVESVNSTSAGYFNSTGGFVSVRMRTGQNVRAWIEFDGGNLEVNVTVAPIGVSRPSRPTFSYRNPEIANYLSSDMYVGFSASKTNWIEAQRVLAWSFSDSGVARELNTTNLPVFLPASSSSSSLSDGAVGGIVVGCFVFLAVLATGVYLWWWKSRGKGYGEDEVEDWELEYWPHRFTYEELSVATGEFRKDHLLGSGGFGRVYKGTLLNQTEVAVKCVSHDSKQGLREFMAEIASMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWIFDQPEKLLRWEYRRRVLVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYQHGEVPNTTRVVGTLGYLAPEIANVAAPTSASDVYSFGVVLLEVACGRRPLETSVPEEEVVLVDMVRELYARGSVIEAADSRIQGEYDVGDMEMVLKLGLACCHPEPHRRPTMKEVVALLLGEDLAEAPGKVLSELARSEEPEEEAAPLQPST* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2326 692 PANTHER - 48 682 - -
Lja4g2326 692 MobiDBLite consensus disorder prediction 673 692 - -
Lja4g2326 692 SMART serkin_6 390 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2326 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 305 IPR013320 -
Lja4g2326 692 Pfam Protein kinase domain 391 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2326 692 CDD lectin_legume_LecRK_Arcelin_ConA 64 303 IPR001220 GO:0030246
Lja4g2326 692 Gene3D Phosphorylase Kinase; domain 1 375 465 - -
Lja4g2326 692 SUPERFAMILY Protein kinase-like (PK-like) 368 659 IPR011009 -
Lja4g2326 692 Pfam Legume lectin domain 63 313 IPR001220 GO:0030246
Lja4g2326 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Lja4g2326 692 CDD STKc_IRAK 396 659 - -
Lja4g2326 692 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 48 682 - -
Lja4g2326 692 Gene3D - 62 315 - -
Lja4g2326 692 Gene3D Transferase(Phosphotransferase) domain 1 466 667 - -
Lja4g2326 692 ProSiteProfiles Protein kinase domain profile. 390 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2326 692 ProSitePatterns Protein kinases ATP-binding region signature. 396 418 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2326 Lja-Chr4 25749463 25751904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2326 59 664 Receptor kinase-like Gene Family AT1G15530 65.802 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja4g2326 Pkinase 9.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2326 - - gmx:100780660 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2326 4 25749463 25751904 Lja4g2326 4 25749463 25751904 ECH