Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2324 ATGGAACATAAGGATCACACCCCAACAGTGGCAAAGGATTACTATTCTAGATCAATATGGTGGTCACAAACTGCGCCTGCTGTTGGGGATCACAAGAGCAGTGACAGAAATGGAGTTAATGGTATTTATTTTGCTGATGGGAAAGATTGGTATAATAACTCCCAAGAAATAGTGACTCCTGAAATTTCTGATACATTTGGAGAACTCAAAGATTTAACTAGTACAAGAAACATAGTTGATGAATTGGAGAATGGCAGTGATGAAATCGGTGAGTATAGCCGCTATACGAGTAGAATGTTGTCAACAGAAATTGTGGAAATAGTTGAGGATGGCAGGAGCATAACAGAAAACAAAGATAGAAAAGTTGATGATCTTTATGTGGCTGTTGGCAAAGATGACTTGGATGTTGTGAAATGGGCTCTTGATCATGCTGTTTCTCCTGGTTCCCGGATTTTTCTTGTCCATGTCTCTCCTCCAATCACATTGATTCCTACGCCAGTTGGAATGTTTGAAAGAAGCCAATTGGCCCCAAACCAAGTGAGACTTTACATCAATGAAGTGCACAACAAGAGGAAGGATCTTTTGCAGAAGTACATCCAAATGAGTACTGAAGCCAAGGTTGCTGCAGAAACATTGCTTCTGGAGAGCAATGACACAGGAAAAGCCATTCTAGATCTTATCTCTATTCTTAACATCACCAACCTTGTGATCGGAATAAAAAAGCTACCCTATTCACGGCGCAATAATAAATTGAGCAAAGGAGAGGTGGTAAAGAAAAATGCACCCCAGTTCTGTGATGTTACATTGATTTATAATGGCAAAGTTTTGGTGTCTGACCCTTACGAGGATGAATTGGCATCCCATGACCCTGCATCAGAAACCAACTCCTCTCGGTGCAAGTGTTTTTCAGGGAAGCTACGTAGGTACTTGTGTTATGAAAAAAACGATTCTAACGGTCAAAGTCGTCAATAG 972 0.4064 MEHKDHTPTVAKDYYSRSIWWSQTAPAVGDHKSSDRNGVNGIYFADGKDWYNNSQEIVTPEISDTFGELKDLTSTRNIVDELENGSDEIGEYSRYTSRMLSTEIVEIVEDGRSITENKDRKVDDLYVAVGKDDLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAPNQVRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIGIKKLPYSRRNNKLSKGEVVKKNAPQFCDVTLIYNGKVLVSDPYEDELASHDPASETNSSRCKCFSGKLRRYLCYEKNDSNGQSRQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2324 323 CDD STK_N 126 273 - -
Lja4g2324 323 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 86 305 - -
Lja4g2324 323 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 86 305 - -
Lja4g2324 323 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 133 247 - -
Lja4g2324 323 Gene3D HUPs 127 256 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2324 Lja-Chr4 25729221 25732036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2324 136 284 U-box Gene Family AT5G61550 33.113 3.19e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2324 - - lja:Lj4g3v1440680.1 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2324 4 25729221 25732036 Lja4g2324 4 25729221 25732036 ECH