Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2303 ATGCATCAAATTATGGTTTCTAGATTGGTTGTGATTCTATCTCTTTGGTCATTGGCCTCAGCATCTCTGCATATTGGTTTCTACAGCTCCACATGTCCATCTGCTGAAGAAATAGTGAGAAACACAGTAAACAAAGCCGTTTCTCTCAACCCAGGCATAGCTGCTGGTTTGATTCGATTGCATTTTCATGATTGCTTTGTGAGGGGTTGTGATGGTTCTGTGTTGCTAGAATCCACTCCCGACAACCCAAGTGTTGAGAGAGACCACCCCGCCAACTACCCAAGCTTACGTGGCTTTGAGGTGATTGAGGAGGCCAAGACCCAATTAGAGGCAACATGTCCTCAAACAGTGTCATGTGCTGACATTCTTGCCTTCGCAGCTCGAGACAGCGCTCTCAAAGTCGGTGGCATTAAGTACGATGTGCCATCAGGACGAAGAGACGGTCGCATCTCCATTAGAGATGAAGTGCCACAAAATCTACCATCTCCTGACTCCAACGCTGATGAACTAGTTAGAAATTTTTCACGAAAAGGTTTGTCACTAGACGAAATGGTTACACTCTCAGGAGCACATTCAATCGGCGTGTCGCATTGTTCCTCCTTCTCTAAGCGCCTCTACTCTTTCAACGATACACATCCTCAAGATTCCTCCATGGACCCTTCTTTCGCTGCATATTTGAAAGCTAAGTGTCCTCAACCACCGAGCAACACGGATCCAATGACGGACTTTGATGCTATTACTCCTATTCGTTTGGATAACAAGTACTATAAGGGAGTCATCAACCATCGTGTCTTGTTGACCTCTGATCAAACGTTGTTGAGCAGTCAATCAACAAGGGAAATGGTTGTGAGCAATGCCAATTACGGTGATAGTTGGGCGATGAAGTTTGGCGAGACAATGGTGCACATGGGTTTCATTGATGTGCTAACTGGCTCTGATGGAGAGATCAGGAAGCATTGCACCTTTGTTAATTAA 975 0.4544 MHQIMVSRLVVILSLWSLASASLHIGFYSSTCPSAEEIVRNTVNKAVSLNPGIAAGLIRLHFHDCFVRGCDGSVLLESTPDNPSVERDHPANYPSLRGFEVIEEAKTQLEATCPQTVSCADILAFAARDSALKVGGIKYDVPSGRRDGRISIRDEVPQNLPSPDSNADELVRNFSRKGLSLDEMVTLSGAHSIGVSHCSSFSKRLYSFNDTHPQDSSMDPSFAAYLKAKCPQPPSNTDPMTDFDAITPIRLDNKYYKGVINHRVLLTSDQTLLSSQSTREMVVSNANYGDSWAMKFGETMVHMGFIDVLTGSDGEIRKHCTFVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2303 324 PANTHER PEROXIDASE 13 322 - -
Lja4g2303 324 Gene3D Peroxidase, domain 2 161 303 - -
Lja4g2303 324 Pfam Peroxidase 39 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 Gene3D - 26 324 - -
Lja4g2303 324 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g2303 324 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Lja4g2303 324 CDD secretory_peroxidase 23 323 IPR033905 GO:0004601|GO:0042744
Lja4g2303 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Lja4g2303 324 PANTHER PEROXIDASE 25-RELATED 13 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2303 Lja-Chr4 25388396 25389631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2303 9 324 Peroxidase AT4G11290 44.969 1.45e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2303 K00430 - gmx:100786791 483.026