Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2301 ATGGAAGTCCCCAAATCCCCTTCCAAAGATAAGCGATTCGCCAAGCATAAATCGCTTTTCAAAATCGCTGCAATCTCTCTTATCATAATGACGCTCTTATCACTGGGTTTCTACCTCGAATCAGATCATTCTACACTCAATGCGTCGTCGTATTACACGGTGGTTATCGATTGCGGAAGCACGGGAACACGGGTGAATGTATATGAGTGGAGGAGGATGGTAGGGGGTGTAATGAGTAAACCGAACTTGCCAATTTTGCTGCATTCTTATCCTGATAGCGCAACAAACAGTTCGCGCTCGCGTTCGAAAGCCTCTTGTCAATATCACTGTATGCAAACTGAACCGGGGTTAGACAAAATGGCTAATGATTCATTAGGGGTTAGACAAGCTTTGGAGCCTTTGATTGTGTGGGCTGAACATCTGGTGCCGCGTGAATTGCGCAGTGAGACTCCGATTTTTGTTCTGGCTACTGCTGGGATGAGGAGGCTGAGGAGTGTTGATGCGGGTCGTGTGTTGGGGGATGTCGAGGCTGTGCTGAAGGAGCACTCTTTTATGTTTAGTAAGAGATGGATTAGGGTTTTGACTGGGAGGGAGGAAGCTTATTATGGTTGGCTGGCTTTGAACTACAAAATGGGCAGCTTTGATCATGATACTGGGGCTCCTACTTTGGGACTTGTTGATTTGGGTGGCTCGTCGTTGCAGGTTGTGATGGAGATAGATGGTCAGCGGGATGATGTGCACGCGATGAGATCAGAGCTTAGTACGGTTGAACATCGGATTTTGGCATACTCACTGCCTGCATTTGGTTTGAATGAAGCATTTGATAGGACGGTTCTAATGCTCAGAAACAATCAGAGTGTGGAAAGAACCAGGAGTGTGCCTGAACTCAGACATCCTTGTTTGATGTCTACTTTAGTACAGAATTATACCTGCTATTATTGCTCTGGATTTGATGTCGCTTATCAGAAAAATGATAGCCAACCCCAGAAAACTGGACTTCATTCTTTACGTCTAATTGGAGAACCGGATTGGGAGCAATGCAGAGAACTAGCTATTGCTGCTGCTATGAACTTGAGCAATTATGGTGTTTCACATCCGGCAGTTCACAAAAATTGCCAAGCTAATTCATTTTCAGGCACTGGTATACTTAATTTAACAGCTGTTATGCTCCCAATCAAGCAGTTTCATGCTTTATCTGGTTTCTTTGTTGTCTATAATAAGCTAAATTTGAGCCCCAAAGCCAACTTAACAACGGTCTGGGAGTCAGGCAAGGAAATATGTTCAAATTTATGGGCCGGCTTGAGCAGTATTTCAGACAATCCAAATTATGCTGGACAATTTTGTTTCCAGGTGGCTTATATGGCATCATTGATTGAGTATGGTCTATGTCTCGGTGATGTAGAAATGGTATTTGGTCCTGGTGATGTTTCCTGGACACTAGGAGCAGCATTGATTGAAGGGAAATTTCTGTGGTTAAATACAACAAGCCTCAAAGCCCAGACTATCATTTCAACTTTAAAGAATGTCAAGGTCATGTCTTCCTCAACTTTTCTTTTTGCTGTACTTCTATTGCTTTTATTTATTGTGTATTTTAGTCAAATCAAGCTACCAATGCCAAGCAGGAGGGCTTCTACTCCTAGCCTAACTTTGCCATCTTGTACTCTCACAAGACGCCGATCTAATTAA 1686 0.4336 MEVPKSPSKDKRFAKHKSLFKIAAISLIIMTLLSLGFYLESDHSTLNASSYYTVVIDCGSTGTRVNVYEWRRMVGGVMSKPNLPILLHSYPDSATNSSRSRSKASCQYHCMQTEPGLDKMANDSLGVRQALEPLIVWAEHLVPRELRSETPIFVLATAGMRRLRSVDAGRVLGDVEAVLKEHSFMFSKRWIRVLTGREEAYYGWLALNYKMGSFDHDTGAPTLGLVDLGGSSLQVVMEIDGQRDDVHAMRSELSTVEHRILAYSLPAFGLNEAFDRTVLMLRNNQSVERTRSVPELRHPCLMSTLVQNYTCYYCSGFDVAYQKNDSQPQKTGLHSLRLIGEPDWEQCRELAIAAAMNLSNYGVSHPAVHKNCQANSFSGTGILNLTAVMLPIKQFHALSGFFVVYNKLNLSPKANLTTVWESGKEICSNLWAGLSSISDNPNYAGQFCFQVAYMASLIEYGLCLGDVEMVFGPGDVSWTLGAALIEGKFLWLNTTSLKAQTIISTLKNVKVMSSSTFLFAVLLLLLFIVYFSQIKLPMPSRRASTPSLTLPSCTLTRRRSN* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2301 561 Gene3D Exopolyphosphatase. Domain 2 196 470 - -
Lja4g2301 561 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 4 560 IPR000407 GO:0016787
Lja4g2301 561 CDD NBD_sugar-kinase_HSP70_actin 54 271 - -
Lja4g2301 561 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 4 560 - -
Lja4g2301 561 Gene3D - 39 195 - -
Lja4g2301 561 Pfam GDA1/CD39 (nucleoside phosphatase) family 46 486 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2301 Lja-Chr4 25373421 25376497 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2301 21 504 Nodulin-like Gene Family AT4G19180 35.628 6.91e-92 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2301 - - lja:Lj0g3v0308679.1 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2301 4 25373421 25376497 Lja4g2301 4 25373421 25376497 ECH