Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2259 ATGAAGGAAACCGGTGATGGGTTTGTGAGAGCGGATCAGATTGATCTGAAGAGCATAGATGAACAGCTTGAGAGGCATCTCAACAAGGTGTTGACCATCGACAAGAAGAAACGCTTAGAAGATGAAGATTCTGCTGCTGGTTCTGATCATCATCATCATGTTCATGTTCATTCAAGCGCTTCTGCTTCCCCCACTGCCATTAAGTTCAGACCTGTTGGTGGGGTTAGCTTCAAGAATCCGAAGCAGGAGTGGGAGATTGAACCTTCCAAACTCATCATCAAGAGTGTTATAGCTCGTGGAACTTTTGGTACAGTCCATCGTGGTGTCTATGATACACAGGATGTTGCTGTGAAATTGCTGGACTGGGGTGAAGAAGGCCAAAGGACTGAAGCTGAAGTTGCTTCCTTGAGGGCAGCGTTTATTCAGGAAGTTGCTGTGTGGCATAAACTTGATCATCCCAATGTCACAAAGTTTATAGGGGCAACAATGGGATCTTCAGAATTGCAGATACAAACTGATAATGGTCTAATTAGCATGCCAAGCAACATCTGTTGTGTTGTTGTGGAATATCTTGCTGGCGGTACGCTGAAGTCATACTTAATAAAGAACAGGAGAAGGAAGTTAGCTTTTAAAGTTGTCATTCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTCCACTCTCAGAAGATTGTCCATAGAGACGTGAAGACAGAGAACATGCTGCTGGACAAGACGCGAACGGTTAAAATTGCTGATTTTGGGGTTGCTCGCGTTGAAGCGTCAAATCCTAATGATATGACTGGGGAGACTGGTACTCTTGGTTATATGGCTCCAGAGGTCTTAAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGTATCTGTTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAAATTACTTCAGCCGTGGTTCGCCAGAATTTGAGACCAGAAATACCGAGATGCTGCCCGAGTTCCCTTGCGAATGTAATGAAGAAATGCTGGGATGCGACTCCTGATAAGCGGCCGGAGATGGACGAGGTAGTTTCCATGATGGAGGCCATTGACACATCCAAAGGTGGAGGTATGATCCCTTTTGACCAGCAGCAGGGTTGTCTTTGCTTCCGCAAGCATAGAGGGCCTTGA 1185 0.4523 MKETGDGFVRADQIDLKSIDEQLERHLNKVLTIDKKKRLEDEDSAAGSDHHHHVHVHSSASASPTAIKFRPVGGVSFKNPKQEWEIEPSKLIIKSVIARGTFGTVHRGVYDTQDVAVKLLDWGEEGQRTEAEVASLRAAFIQEVAVWHKLDHPNVTKFIGATMGSSELQIQTDNGLISMPSNICCVVVEYLAGGTLKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSLANVMKKCWDATPDKRPEMDEVVSMMEAIDTSKGGGMIPFDQQQGCLCFRKHRGP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2259 394 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 388 - -
Lja4g2259 394 SUPERFAMILY Protein kinase-like (PK-like) 74 365 IPR011009 -
Lja4g2259 394 Gene3D Transferase(Phosphotransferase) domain 1 192 384 - -
Lja4g2259 394 MobiDBLite consensus disorder prediction 42 56 - -
Lja4g2259 394 PRINTS Tyrosine kinase catalytic domain signature 188 201 IPR001245 GO:0004672|GO:0006468
Lja4g2259 394 PRINTS Tyrosine kinase catalytic domain signature 292 314 IPR001245 GO:0004672|GO:0006468
Lja4g2259 394 PRINTS Tyrosine kinase catalytic domain signature 336 358 IPR001245 GO:0004672|GO:0006468
Lja4g2259 394 PRINTS Tyrosine kinase catalytic domain signature 226 244 IPR001245 GO:0004672|GO:0006468
Lja4g2259 394 CDD STKc_MAP3K-like 97 365 - -
Lja4g2259 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Lja4g2259 394 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 388 - -
Lja4g2259 394 SMART serkin_6 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2259 394 ProSiteProfiles Protein kinase domain profile. 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2259 394 Pfam Protein tyrosine and serine/threonine kinase 93 364 IPR001245 GO:0004672|GO:0006468
Lja4g2259 394 MobiDBLite consensus disorder prediction 42 63 - -
Lja4g2259 394 Gene3D Phosphorylase Kinase; domain 1 80 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2259 Lja-Chr4 24831812 24836665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2259 1 326 MAP Kinase Kinase Kinase AT5G50000 78.528 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lja4g2259 PK_Tyr_Ser-Thr 1.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2259 - - gmx:100807921 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2259 4 24831812 24836665 Lja4g2259 4 24831812 24836665 ECH