Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2253 ATGGCTGCTCGCACTCTTTCTTATCTGCTTTCTCGCTCTCGCTCTCTTTCTTCTTCTTCTGGAGCTGCTTCTCTGCTTCCCTCACTTGGAGGAAAATCTGGAGGGTGGAGAAACAGTAACAGTCACAGATATAGTACTGCAGCAGAAGTTGAGGAATTGATCACTCCACAAGTTTCAATCAATTACACACAGCATCTCATAAATGGGAAATTTGTGGATGCTGCATCAGGGAAAACTTTTCCAGCCTATGACCCGCGCACAGGGGATGTGATTGCTCATGTTGCTGAAGGCGATGCTGAAGATGTCAACCGTGCGGTGGCAGCAGCTCGCAAGGCCTTTGATGAAGGCCCTTGGCCAAGAATGACTGCTTATGAAAGAAGTCGGATATTGCTGCGCTTCGCTGATTTGGTTGAGAAGCACAACGATGAGATTGCAGCTCTGGAGACATGGAACAATGGAAAGCCTTATGAACAGGCAGCCAAGGCTGAAGTGCCAATGTTGGTGCGTTTATTTCGCTATTATGCTGGCTGGGCAGATAAAATTCATGGGTTGACTGTCCCTGCTGATGGAAATTATCATGTCCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCTTGGAACTTTCCTCTAATTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAACACCATTGTCCTTAAGACTGCTGAGCAAACACCGCTAACGGCTCTTGTTGTGGCAAAATTACTTCATGAGGCTGGTCTTCCCCCAGGTGTGCTGAACATAGTTTCCGGGTATGGTCCGACTGTTGGTGCACCTCTTGCAAGTCACATGGATGTGGACAAGCTAGCATTCACTGGATCAACTGATACTGGAAAAGTTGTACTTGGATTGGCTGCAAAAAGTAATCTTAAGCCAGTGACATTGGAGCTTGGAGGGAAATCACCTTTCATAGTATGTGAGGATGCTGATGTTGACAAGGCTGTTGAGCTTGCACACTTCGCTCTGTTCTTTAATCAGGGGCAATGTTGCTGTGCTGGGTCTCGAACCTTTGTACATGAGCGTGTCTATGATGAGTTCTTGGAGAAATCAAAGAAACGGGCTTTGAGGCGTGTTGTTGGTGATCCGTTCAAAAAGGGTGTTGAACAAGGTCCTCAGATTGATACAGAACAATTCGAGAAAATTCTTAGGTACATCAAATCTGGAATTGAAAGCAATGCCACCCTTGAGTGTGGCGGTGATCGATTGGGGTCAAAAGGCTTCTATGTCCAGCCAACCGTCTTCTCAAATGTTCAGGATGATATGCTGATAGCACAAGATGAAATCTTTGGCCCTGTTCAGACCATTTTCAAATTCAAGGAAATTGATGAAGTAATTCGACGGGCAAATTCAACGCGGTATGGTCTAGCGGCTGGTGTGTTCACCCAGAACTTGGCCACTGCCAACACTTTGATGAGGGCACTGAGAGCTGGAACTGTGTGGATCAATTGCTTTGATGTGTTTGATGCTGCAATTCCTTTTGGTGGTTACAAGATGAGTGGGATTGGAAGGGAGAAAGGGATCTACAGTCTTCTCAACTACCTTCAGGTGAAAGCTGTTGTCACACCATTGAAGAATCCTGCGTGGCTGTAA 1632 0.4596 MAARTLSYLLSRSRSLSSSSGAASLLPSLGGKSGGWRNSNSHRYSTAAEVEELITPQVSINYTQHLINGKFVDAASGKTFPAYDPRTGDVIAHVAEGDAEDVNRAVAAARKAFDEGPWPRMTAYERSRILLRFADLVEKHNDEIAALETWNNGKPYEQAAKAEVPMLVRLFRYYAGWADKIHGLTVPADGNYHVQTLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKTAEQTPLTALVVAKLLHEAGLPPGVLNIVSGYGPTVGAPLASHMDVDKLAFTGSTDTGKVVLGLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKGVEQGPQIDTEQFEKILRYIKSGIESNATLECGGDRLGSKGFYVQPTVFSNVQDDMLIAQDEIFGPVQTIFKFKEIDEVIRRANSTRYGLAAGVFTQNLATANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLLNYLQVKAVVTPLKNPAWL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2253 543 SUPERFAMILY ALDH-like 57 537 IPR016161 GO:0016491
Lja4g2253 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 313 502 IPR016163 GO:0016620
Lja4g2253 543 Pfam Aldehyde dehydrogenase family 71 533 IPR015590 GO:0016491
Lja4g2253 543 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 337 348 IPR016160 GO:0016491
Lja4g2253 543 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 309 316 IPR029510 GO:0016491
Lja4g2253 543 CDD ALDH_F2BC 60 535 - -
Lja4g2253 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 531 IPR016162 GO:0016491
Lja4g2253 543 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 32 543 - -
Lja4g2253 543 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 32 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2253 Lja-Chr4 24751045 24755118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2253 1 543 Aldehyde Dehydrogenase Gene Family AT3G48000 77.757 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2253 K00128 - qsu:112020173 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2253 4 24751045 24755118 Lja4g2253 4 24751045 24755118 ECH