Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2234 ATGTCGCTCAAAAGGGGTGCCGATGATGGCAAGAGTTCCGATGATAAGCGTAGAAAACCTCCACCTTTCTCCAGTGTGGTGCGGGAGGTGATGAAGTTACAATCAGTCAGGAATGTGCTGGAGCCAATTCTTGAGCCCTTGGTTCGGAGAGTGGTTAGGGAGGAAGTTGAGTTGGCTCTTAAGAAGCATTTATCCAGCATGAAACAGGCCTATGGAAAGGAAATGAATATTACTGAATCAAGAACTTTGCAGCTACAGTTTGAAAACGGCATTTGTCTTCCAGTATTCACTGGAGCTCGAATCGAAGGAGAGGATGGCTCCAATTTAAGGATAAGTTTAGTTGATGCCGTAACAGGGAAGGTTGTGAGTACAGGACCTGAATCTTCAGCTAAGGTCGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAGGTGGTATTTGGATGCCTGAAGAGTTCAAGAGCAATATTGTGAAAGAAAGGGAAGGAAAAAAGGCCCTCCTTACAGGAGATGTAATTTTTTATCTAAAAGATGGGGTTGGTGTGGTGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGAAGTCGTAGGTTCAGGCTTGGGGCAAGAGTTGTGGACTACTTTGATGGTATTAGAATAAGAGAAGCAAAGACAGAGTCATTTATTGTCAGGGATCACAGAGGAGAATTGTACAAGAAGCACCACCCTCCAAGTTTGTCTGATGAAGTTTGGAGACTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCTATACTGTTAAAGATTTTCTCACACTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTTGGCACTGGGATGTCTGCAAAGATGTGGGAAGTGACTCTGGAACATGCTCGAACTTGTGTACTTGATATGACGAGGAACCTGTACTTCCCTGCTCATTCACAACAAACCGGTGTTGTCTTCAATGCAGTGGGACAAGTGACAGGACTGATCTCTGAAGGCGAGTATGCCGATGTAGATAAGCTGTCCGAAACTGAAAAGGCTGATGCTCAAAACTCAGTTATTTCTGCACTTAACCAAGGGGATTTTGCCTCTTTTGAAGATGAAGCCTCCCTCATCGATCGGTCTTCGCACTTAACTAATGCACTTTACTCCCCAAGCTCTCCCAGGACCGAGGGATCAAGTGCAAACAAACTTTTGGGTCCTCAAAAGCCTGGAGGGTTCGATTACACCCCAGCAAGTGCCTCTTCTCCAGATATCATGTCGTCCATTTATTCCGTTGCTGGAACTAGTGGCTTGGATGACTATGGCTTGTCTAGTTTTGACAGCATGAGCCTTAGATATGATCAAGCTCTTGGTTTTCCAGTCTCCAACTCTTTGATCTGTGACACAGATTCAATGGCCCATGTTTTTAGTGATGAAGATCATTTGCAGTTTTTCGATACTGATCTCCAATCACAGTTCCACATCCAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGGTGGCACGCACTACGACCGTGGCCAATGGTAAAGCTCAGAGGAGATGGCGAAAGCTGTTCAACGTTCTGAAATGGTTCATGGTGAGGAAACGACCAAACCAGAGATACAGGTAA 1638 0.4463 MSLKRGADDGKSSDDKRRKPPPFSSVVREVMKLQSVRNVLEPILEPLVRRVVREEVELALKKHLSSMKQAYGKEMNITESRTLQLQFENGICLPVFTGARIEGEDGSNLRISLVDAVTGKVVSTGPESSAKVEIVVLEGDFEEEGGIWMPEEFKSNIVKEREGKKALLTGDVIFYLKDGVGVVGEISYTDNSSWTRSRRFRLGARVVDYFDGIRIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKIYTVKDFLTLLNLDPAKLRSILGTGMSAKMWEVTLEHARTCVLDMTRNLYFPAHSQQTGVVFNAVGQVTGLISEGEYADVDKLSETEKADAQNSVISALNQGDFASFEDEASLIDRSSHLTNALYSPSSPRTEGSSANKLLGPQKPGGFDYTPASASSPDIMSSIYSVAGTSGLDDYGLSSFDSMSLRYDQALGFPVSNSLICDTDSMAHVFSDEDHLQFFDTDLQSQFHIQADLQSAVDSFMVARTTTVANGKAQRRWRKLFNVLKWFMVRKRPNQRYR* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2234 545 MobiDBLite consensus disorder prediction 1 24 - -
Lja4g2234 545 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
Lja4g2234 545 PANTHER CALMODULIN-BINDING PROTEIN 60 A 8 539 - -
Lja4g2234 545 Pfam Calmodulin binding protein C-terminal domain 315 367 IPR046829 -
Lja4g2234 545 MobiDBLite consensus disorder prediction 389 404 - -
Lja4g2234 545 MobiDBLite consensus disorder prediction 389 420 - -
Lja4g2234 545 PANTHER OS02G0177800 PROTEIN 8 539 IPR012416 GO:0005516
Lja4g2234 545 MobiDBLite consensus disorder prediction 1 23 - -
Lja4g2234 545 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2234 Lja-Chr4 24555400 24560244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2234 1 354 Calmodulin-binding Proteins AT5G62570 60.388 3.62e-152 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2234 - - gmx:100793156 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2234 4 24555400 24560244 Lja4g2234 4 24555400 24560244 ECH