Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2170 ATGTTCAGGGTTTTGGTTACCAGAGCAGCAAGGGTTTCAGCTCCAACCAACCGCAATGCATTGGTTTCTTTCTCTCGGTATGCTCATTCATTACAGTTTGCTACTGTAGAAGCAGAAGAGGTATCAGGCTCAAGGCCTGCTGAAGTTTTGAACTTGGTGCAGGGTAAATGGGTAGGATCTTCAAACTGTAATACAATTGTGGATCCTTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGAAGCGGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAGCATGGTTTACACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTTGGGAGACGTAACTACCAAGGCAGCTCACATGCTATCGCTTCCTAAGGTTTCAGATTTCTTTACAAGGCTTATACAAAGAGTTTCTCCAAAAAGTTACCAGCAGGCTCAAGGGGAAGTTTATGTGACACAGAAGTTTCTGGAAAATTTTTGTGGAGATCAGGTTCGGTTCCTGGCAAGATCTTTTGCAGTACCTGGAAATCATCTTGGGCAACAAAGCCATGGTTTTCGTTGGCCATATGGTCCGGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCAGTCCTTCAGTTGATGGGTGCACTTTATATGGGAAACAAGCCAGTCCTTAAAGTCGATAGCAAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTTCTTCATAACTGTGGTTTACCGGCAGAAGATGTAGACTTCATAAATTCTGATGGGAAGGCAATGAACAAGCTGTTACTGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTTGCAGAGAAGTTGGCTGGTGATTTGAAGGGCCGCATTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGAAGATTACATTGCATGGGTCTGTGACCAGGATGCATATGCATGCAGTGGTCAGAAGTGCTCGGCACAATCATTGTTATTTGTGCATGAGAACTGGTCTAAGACATCCTTAATATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGCAGACTTGACTATTGGTCCAGTTCTCACTGTTACAACAGAGACAATGCTAGAACACGTGAATAAATTACTTGAGATACCAGGGTCAAAGCTTCTCTTCGGTGGTCGACCTTTGGAGGACCATTCAATTCCATCAATTTATGGTGCTATTAAACCAACTGCTGTTTATGTTCCTCTTGAGGAAATTGTGAAGGATAAGAATTATGAGCTAGTTACAAAAGAAATATTCGGACCTTTTCAGATTGTTACTGACTACAAAAGCAGTCAACTATCAATTGTGTTGGATGCTTTGGAGAAAATGCATGCCCATTTAACTGCTGCTGTAGTTTCTAATGATCCTTTATTTTTACAGGAAGTAATTGGCAAATCAGTCAATGGTACTACTTATGCTGGTCTAAGAGCAAGAACAACTGGAGCTCCACAGAATCACTGGTTTGGACCTGCGGGTGACCCTAGGGGTGCAGGAATTGGAACACCAGAAGCCATAAAACTAGTGTGGTCTTGTCACAGAGAAATTATCTACGATATTGGACCTGTGCCAGAACATTGGGAAATTCCTCCATCAACTTGA 1656 0.4227 MFRVLVTRAARVSAPTNRNALVSFSRYAHSLQFATVEAEEVSGSRPAEVLNLVQGKWVGSSNCNTIVDPLNGDSFIKVAEVDEAGIQPFVESLSSCPKHGLHNPFKAPERYLMLGDVTTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAQGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHNCGLPAEDVDFINSDGKAMNKLLLEANPRMTLFTGSSRVAEKLAGDLKGRIKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFVHENWSKTSLISKLKDLAERRKLADLTIGPVLTVTTETMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIVKDKNYELVTKEIFGPFQIVTDYKSSQLSIVLDALEKMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPVPEHWEIPPST* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2170 551 Pfam Aldehyde dehydrogenase family 65 492 IPR015590 GO:0016491
Lja4g2170 551 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 18 550 IPR044638 GO:0004029
Lja4g2170 551 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 18 550 - -
Lja4g2170 551 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 42 300 IPR016162 GO:0016491
Lja4g2170 551 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Lja4g2170 551 SUPERFAMILY ALDH-like 51 518 IPR016161 GO:0016491
Lja4g2170 551 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 301 492 IPR016163 GO:0016620
Lja4g2170 551 CDD ALDH_F12_P5CDH 51 539 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2170 1 551 Aldehyde Dehydrogenase Gene Family AT5G62530 80.576 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2170 K00294 - gmx:100806579 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2170 4 23385919 23392965 Lja4g2170 4 23385919 23392965 ECH