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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lja4g2150
ATGGTTCACGTCTCCTTCTACAGAAACTATGGGAAAACCTTCAAGAAGCCTCGTCGCCCCTACGAGAAGGAGCGTTTGGATGCAGAGCTGAAGCTCGTCGGAGAGTACGGGCTCCGCTGCAAGAGGGAGCTCTGGAGGGTGCAGTACGCTCTCAGCCGCATCCGCAACAATGCTAGGAACCTGCTGACGCTTGACGAGAAGAACCCTCGCCGGATCTTCGAGGGTGAGGCTCTTCTCAGGAGGATGTTCCGTTATGGGCTTCTTGATGAGACCCAGAACAAGCTTGATTATGTGCTCGCTCTTACTGTTGAGAACTTTCTCGAGCGCCGCCTGCAAACCCTGGTTTTCAAGTCTGGTATGGCTAAGTCTATTCATCATGCTAGGGTTCTCATCAGGCAGAGGCACATCAGGGTTGGGAGGCAGGTTGTGAACATCCCATCATTCATGGTGAGGATGGATTCACAGAAACACATTGACTTTTCACTCACAAGTCCTCTTGGTGGTGGTCGCCCAGGACGTGTGAAGCGAAAGAACATGAAGGCTGCTGCCAAGAAGGCTGCTGGTGGCGACGGTGATGAGGAGGATGAAGATTAA
594
0.5269
MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARNLLTLDEKNPRRIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRMDSQKHIDFSLTSPLGGGRPGRVKRKNMKAAAKKAAGGDGDEEDED*
198
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lja4g2150
197
Pfam
Ribosomal protein S4/S9 N-terminal domain
8
108
IPR001912
GO:0019843
Lja4g2150
197
ProSiteProfiles
S4 RNA-binding domain profile.
109
183
-
-
Lja4g2150
197
Gene3D
-
108
165
IPR036986
GO:0003723
Lja4g2150
197
PANTHER
30S 40S RIBOSOMAL PROTEIN
5
197
IPR022801
-
Lja4g2150
197
SUPERFAMILY
Alpha-L RNA-binding motif
12
159
-
-
Lja4g2150
197
TIGRFAM
uS4_arch: ribosomal protein uS4
11
166
IPR005710
GO:0003735|GO:0006412|GO:0015935
Lja4g2150
197
MobiDBLite
consensus disorder prediction
162
197
-
-
Lja4g2150
197
PANTHER
40S RIBOSOMAL PROTEIN S9-2-LIKE
5
197
-
-
Lja4g2150
197
SMART
Ribosomal_S4_2
8
108
IPR001912
GO:0019843
Lja4g2150
197
SMART
s4_6
109
180
IPR002942
GO:0003723
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lja4g2150
Lja-Chr4
23065238
23067091
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lja4g2150
1
187
Cytoplasmic Ribosomal Protein Gene Family
AT5G39850
90.909
9.57e-126
351
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lja4g2150
K02997
-
gmx:100305663
356.681
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