Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2134 ATGGGTTGCATTGGCTCCCGCATCTGTTGGACGCTCATCACCCTTCTTTTCATGTCGCTCCTGATTTTATACATCATATTAGGGATAACCGCCCCTTCAAGCATCAAGTTTCACGTAACTGATGCTTCCCTAACACATTTCAACCTCACCAGTAACAACACCTTATATTATAAATTCAAGGTCAACATCTCAGTAAGAAACCCCAATAAAAATGTGGAGGTCGATTACCGGAGCATCAAAGCAATTGCTTGGTACAAAGATAACGACTTTGGTTGGGTGAACTTGACACCCTTCTATCAAGGGCACAAGAATACCTCTTTGCTTGAGTCTGTAGCTTTTGAAGGAAATAGCATCATCAAACTCAAATCTCACCAACTTGCTGAGTATAATGAGGAAACACGTGTGGGTATTTACAATGATTTGGCTGTGGATTTGGATCTTGTAATTAGAGCTAAGTATGGACGGAACTACTATGGTAACTTTTTCAGATCCATTGTAAGATGTCGTCGTTTGAGAGTTCCTTCGATTTCTAGTGCACCTCCTTTCAATGTCACTAATTGCAACACTGTTTCACTCATCTGA 582 0.4072 MGCIGSRICWTLITLLFMSLLILYIILGITAPSSIKFHVTDASLTHFNLTSNNTLYYKFKVNISVRNPNKNVEVDYRSIKAIAWYKDNDFGWVNLTPFYQGHKNTSLLESVAFEGNSIIKLKSHQLAEYNEETRVGIYNDLAVDLDLVIRAKYGRNYYGNFFRSIVRCRRLRVPSISSAPPFNVTNCNTVSLI* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2134 193 Pfam Late embryogenesis abundant protein 62 141 IPR004864 -
Lja4g2134 193 PANTHER HARPIN-INDUCED 1 14 189 - -
Lja4g2134 193 PANTHER OS05G0367900 PROTEIN 14 189 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2134 Lja-Chr4 22876765 22877346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2134 35 174 SNARE and Associated Proteins AT1G32270 33.333 3.58e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2134 - - gmx:100784278 221.861