Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2125 ATGAAAAATGAGGATAAAAGGGTGGTGAAATTTCCCTTTATTTTTTCCTTGTTTTCTATTATTTTCCTTAACCTCACAACAAACTGTGCTTCTTCCACCACTGACCCTTCTTTCTCCCCTTCTGTGAATTACCTCATTGATTGTGGCTCCTCCAATGCCACTCATCTCAAAGATGGTAGAACCTTCAAATCAGATCGTGAGACCACTTCTCTCCTTTCCACAACTGAAGATTTGCAAATCTCAGTTGATTCCATCAACATAAACACCCCTCCATCTTTACCTTCTTCATCATTACCTTTGTTCCAAAGTGCTAGAGTTTTAAGAGAGGAATCAGCATACACATTTTACATATCCAAACCCGGTAGACTTTTTGTTCGCCTCTACTTCTTCCCTCTCCCTGACCCTTCTTTCAATCTAACAAGTGCTGTTTTTTCTGTCCAAACTGATCATGTTGTGTTATTACATGAATTCTCTGTGAGGAAGAATGACTCACTAGTTTTCAAGGAGTATCTTGTCAATGTTCCGGATAGTAGATTCTCCCTCAAATTCAAGCCAAAGAAAGAGTCTTTTGCATTCATCAATGCAGTTGAGGTTGTCTCTGCCCCTGACACTCTTATATTGGATTCAGCAACTGCAGTTTCACTTTCCCCAATTGGAGAATTCAAGGGCTTGTTGAATTCTGCTCTCCAAGTATCCTACAGGGTCAATGTTGGTGGCCCCACCATAAATCCTGAAAATGACACCTTGTCAAGAACATGGGAACCTGATGTCCCATATAACACTTTCCCACAAGGGTCAACTAGTGTTGCTGTATCCAAAAAAACCATCAAGTATCCAAAAACTGGTGCTACACCTTTGATTGCTCCAAATTTGGTTTATGAAACAGCAGTGCAAATGCAGGATCCTGAAGTGATGCACCCAAATTTCAACCTCACCTGGATGATGAATGTGGAAAAGAGCTACTCTTATTTAATAAGAATGCATTTCTGTGACATTGTGAGTAAAAGTCTTAATCAATTGTACTTCAATGTATACATCAATGGGATTGAGGTTGTGTCAGCTTTAGACCTTTCATCAGAAACCAAAGCTCTAGCCACTGCATTTTACAAGGACTTTGTTTTGAATGATTCTGCCATCACAAATGGTTCAATTCAGGTTCAGGTAGGACCAGCTAATCTCAAACAAGGCACGGCCAATGCAATTCTTAATGGAATTGAGGTGATGAAGATGAGCAACTCTGCTGATAGTTTGGATGGTTTTTTCAATGTTGAAGGGAAATTCAAAGGACCAGGTTCAACTTCCACAGCAATGAAAATTGCTGCTGGTGTTGGTTTAGGATTGGCTTTGATAGCATTGGTGTTACTATTAGTGATTTGCATCAGGTGGCAAAGAAGGCCTGAAGAGTGGGAAAAGCTTGGACCTTTCTCATCATGGATCCTCCCTCTCCGTTCACCCTGCACAACTAGATTATTTTCAAGCAAAAGCAGAACTCAAAGCTCAACAACCAGACTCACTTCCCGCAAGAGCAAAAATGCTCATTCTGTACACCACCATTCCCCAAGAGGGCCTGGAAGATTCTTCCCTTTCAATGAACTTCAACAAGCCACACAAAACTTTGATGAAAAGAGAGTGATTGGTGTTGGAGGCTTTGGGAACGTGTACCTCGGAACATTAGAAGATGGGACAAAGGTTGCTGTGAAACGAGGAAATGGTAGCACAGAACAAGGCATCAATGAGTTCAGAACTGAGCTGAACATGCTTTCCAATCTCCGCCATCGCCACCTAGTCTCATTGATGGGATTCTGTGATGAAGACAATGAGATGGTTCTTGTGTATGAGTACATGGCGAACGGCTCCTTTCGTTCGCACCTTTACGGCTCCTCCAATTTCCCTCTTTTGCCGTGGCAAAAGAGGCTTGAGATTTGCATCGGTGCAGCTCGCGGGCTGCACTATCTTCACACTGGTGCGACTGAGAGCATCGTGCACCGTGATGTGAAGACAACAAACATCCTCTTAGATGAGAACTATGTTGCTAAAGTTTCAGACTTTGGATTATCAAAAGCTGTGCCTGATGAAGCTCAAGTTAGCACAGCTGTGAAGGGTAGTTTTGGGTACCTTGATCCTGAGTATTATAGAAGCCAACAACTAACTCAAAAATCTGATATATACTCTTTCGGGGTTGTTCTTGTTGAGGTTCTTTGTGCTAGGCCTGTTGTTTGTCCCTCACTGCCTAGGGAACAGGCTAACTTAGCTGATTGGGCAATGCAACAACACAGAAGAGGCATGTTTCATGAGATAATTGATCCTCGCATTGTTGACACTATAAGTCCTCAATCCTTGAAGACTTTTATGCTTATTGCTGAGAAATGTTTAGCAGATCAAGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTGGAAAATGCTTTGAAACTACAAATTGATGATGAGCCTGGAAATAGAAGAACAGATTCAACCACTTCTGATCAACACCCAAACAAATGTGATAAAATAGCAGACCACTCATCAGCTGCCCACACAAGTGATGTTTCTGATAGAACAGATGATGATTCTGCTTCTTTGTTCTCTCAGATGGTAAATTTGCAAGGAAGGTGA 2622 0.4191 MKNEDKRVVKFPFIFSLFSIIFLNLTTNCASSTTDPSFSPSVNYLIDCGSSNATHLKDGRTFKSDRETTSLLSTTEDLQISVDSININTPPSLPSSSLPLFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSVQTDHVVLLHEFSVRKNDSLVFKEYLVNVPDSRFSLKFKPKKESFAFINAVEVVSAPDTLILDSATAVSLSPIGEFKGLLNSALQVSYRVNVGGPTINPENDTLSRTWEPDVPYNTFPQGSTSVAVSKKTIKYPKTGATPLIAPNLVYETAVQMQDPEVMHPNFNLTWMMNVEKSYSYLIRMHFCDIVSKSLNQLYFNVYINGIEVVSALDLSSETKALATAFYKDFVLNDSAITNGSIQVQVGPANLKQGTANAILNGIEVMKMSNSADSLDGFFNVEGKFKGPGSTSTAMKIAAGVGLGLALIALVLLLVICIRWQRRPEEWEKLGPFSSWILPLRSPCTTRLFSSKSRTQSSTTRLTSRKSKNAHSVHHHSPRGPGRFFPFNELQQATQNFDEKRVIGVGGFGNVYLGTLEDGTKVAVKRGNGSTEQGINEFRTELNMLSNLRHRHLVSLMGFCDEDNEMVLVYEYMANGSFRSHLYGSSNFPLLPWQKRLEICIGAARGLHYLHTGATESIVHRDVKTTNILLDENYVAKVSDFGLSKAVPDEAQVSTAVKGSFGYLDPEYYRSQQLTQKSDIYSFGVVLVEVLCARPVVCPSLPREQANLADWAMQQHRRGMFHEIIDPRIVDTISPQSLKTFMLIAEKCLADQGVDRPSMGDVLWHLENALKLQIDDEPGNRRTDSTTSDQHPNKCDKIADHSSAAHTSDVSDRTDDDSASLFSQMVNLQGR* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2125 873 ProSiteProfiles Protein kinase domain profile. 539 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2125 873 Pfam Protein tyrosine and serine/threonine kinase 542 804 IPR001245 GO:0004672|GO:0006468
Lja4g2125 873 MobiDBLite consensus disorder prediction 491 524 - -
Lja4g2125 873 ProSitePatterns Protein kinases ATP-binding region signature. 545 567 IPR017441 GO:0005524
Lja4g2125 873 MobiDBLite consensus disorder prediction 817 858 - -
Lja4g2125 873 CDD STKc_IRAK 545 810 - -
Lja4g2125 873 Pfam Malectin-like domain 46 410 IPR024788 -
Lja4g2125 873 SUPERFAMILY Protein kinase-like (PK-like) 522 808 IPR011009 -
Lja4g2125 873 Gene3D Phosphorylase Kinase; domain 1 496 614 - -
Lja4g2125 873 MobiDBLite consensus disorder prediction 491 508 - -
Lja4g2125 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Lja4g2125 873 Gene3D - 228 412 - -
Lja4g2125 873 Gene3D - 39 202 - -
Lja4g2125 873 Gene3D Transferase(Phosphotransferase) domain 1 615 832 - -
Lja4g2125 873 PANTHER OS07G0166700 PROTEIN 24 868 IPR045272 GO:0004714|GO:0006468
Lja4g2125 873 MobiDBLite consensus disorder prediction 817 859 - -
Lja4g2125 873 SMART serkin_6 539 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2125 873 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2125 Lja-Chr4 22789254 22791875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2125 37 829 Receptor kinase-like Gene Family AT5G61350 59.426 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja4g2125 Malectin_like 9.9e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2125 - - gmx:100814982 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2125 4 22789254 22791875 Lja4g2125 4 22789254 22791875 ECH