Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2122 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTCGAGATCTCTGAGAGAGTTTATGTTTTTGACTGTTGCTTCTCTGCGGATGTCTTGGAAGAAGATGAATACAGAGTTTATATGGGGGGGATTGTGACTCAGCTGCAGGATCACTTCCCAGATGCTTCTTTCATGGTGTTTAACTTCAGAGAAGGGATGAGGCGCAGCCAAATCTCAGACATATTTTCTCAATATGACATGACAGTTATGGAGTATCCTCGGCAATATGAGGGTTGTCCTCTTCTTCCTCTAGAGATGATCCATCACTTTCTTCGATCAAGTGAAAGTTGGTTGTCTTTGGAGGGACAACAGAATGTGCTTTTGATGCACTGTGAAAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTATTATATCGGAAACAGTACAGTGGGGAGCTGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAGAGAACTACTCCACCTTTTAACTCCTTTGAACCCACAACCTTCTCAGTTCAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCACCTCCAGAAACACCCTTATATCTGGATTGTCTGATTCTTAGAGTCCTTCCCTTATTTGATGATGGAAAAGGTTGCAGGCCTGTTATACGTGTTTATGGTCCAGACCCTTCAAAACCTGCCAACAGAAGTTCAAAGCTTCTTTTTTCAACTTCAGAATCTAAAAAACATGTTTCCCACTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGATATTCGTTGTCGTGTTCAAGGGGATGTAGTTCTCGAGTGCATACATTTAAGTGAAGATTCTATTCGTGAGGAGATGATGTTTAGAGTTATGTTCCATACTGCATTTGTTCGTTCAAACATATTGATACTGAGCCATGAAGAAATTGATATTCTGTGGGATTTTAAGGATCAATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGATGCTGATGCTGTTATACCTGATCTAAACACAGTCACGGTGAGTGGAGATGCGAATGAGACGGAAAGTGCTGAGACAGAAAGTGCTTCACCTGAGGAATTCTATGAAGTAGATGAAATTTTCAGCAATGTAATTGATGCACAGGAAGGTAGGGCAGAGGATGATTCTCATGCTTTTACTGACAATGCAATGGGTGATGAAAATCATAAAGAGGTCTGGAAGGAAGAGTTGGAGCCTCACTCTTTTCAAGATTGCACGTCGAATGATGGGATTCTCAAACAGGCTGACAAGACAGATTCTGGTATTAGTGCGGTGAAAGACATCTCTATTGATGATGTGAACTACAAGTTCAATGAGAACATGGATTCAGATCCTCATGTAGTGAAGGACATTGCTGTGGATGATGGAGAAATTAAGTCAACTTCCACTGCAGTCACTTCAGATATGGTGAAGCCTTTGGAAATGAAGGAAGTCACTGTAGATGTGCACCAGGAATCTACTGTTATGGAGAACAAATGTGAAGATAATGAAGCAACAGAAAAGGAATTAGATTCCATGGCCGGGGAGTATATGTCTGATATTTCCAAACAAAAATCTGGCAAACCACTTCCATCTACTGCCAAGAAACAACTTCCATCAAATTCAAAGCCAGTTGGAGATACCTTATTAACAAAGCAAAAGACTAAACAGCAAGAAACCCTTGGTTTTCAGGCAAAACAAGCTAAGCCAACTGCAGCAACCAAGTGGATTCCATCTAACAAGGGTTCTTACATAAATTCAATGCATGTCTACTATCCACCAAATAGGATTAATAGTGCACCAGCTGCACTGTCAAATTTGACCTCTTCAAAGGAGAAAATCGAAGATGCCAAAGCAAGATCTGTATCTGCTCCTGTTGTCTCTGCTTCCGCTGTTAATACTAAAAGTGACATGAAAACTCGCAAGTTGGCCATTTCAAAATCAGCAGGCCACATATTAGCAGAAGTAGATGCAAAACGTCCTTCATCACCATTACCATCAATTGAAGAGACATCTCTTCAGTCAGATACTCAAGTACAACAACAGAGCTCAGATCAAGTGCTACAGTCTCCCTTGCCATCTCCCCCTCCATCTCCACCCCATGGAGATACTACTAACTCTTCTTCACATGTCTTTAAACCCTTATCATTACAAGATGATGTATCACCTCAAGCCTCTCCATCATCACTAGTAACATCTTCAGGTGGAAAGGGGTCCATTGCACTGTCGCCGCCTCCACCACCACCGCCGCCACCAACTTTAGCATCATTTACTACACAAAAAGTATGGGTGGATTTACAACTTGCAACTTCTCCCCCTTTCTCTCCACCACCACCTCCACCCCCGCCTCCATTTTCTGGGCTGAATAAAAGGGACTCATTACATTCTACATCTCCCTCCATTTCTGAAGTGCTTACTACAGTGGTCCCTACAAGATCTCCTCCTCCTCCACCACCACCACCATTGCCTCCTCCAAGGTATGAAGTTCCATCCATTCCTCCTCCACCTCCACCTCCCCCCCTAACACCATCAACAACACCTCCTTTAGAGCATGGAGTTCCGCCAATGCCCCCTCCTCCTCCTCCATTTCCTACATCTTCAATACATAAGGCTCCAACTCCAACCCCACCAGCCCTAATCTCATCACATACAGCTCCACCGGCACCCCCACCTCCACCTCTCTTAGCTAATGCTCAGATACCTACATTACCCTTAACTACACCTCCACCTCCACCTCCATTGCCTTTTAATAGTGCTCCACCACCACCACCACCTTCACCTATTAGTAGGGCTCCACCACCGCCACCTCCACCTCCTTTTAGTAGTGCTCCTCCTCCACCACCTCCACCTCCCCCACCTCCTCCATTGCAAGGATCTGCACCTGCACCTCCCCCACCGCCACCTCCACCTCCTTTTAGTAGTGCTCCTCCTCCGCCACCTCCACCTCCCTTTGGTAGAGCTCCACCTCCGCCACTTCCACCTCCCTTTGGTAGAGCTCCACCTCCGCCACCTCCACCTCCCTTTGGTAGAGCTCCACCTCCATTGGGTGGAGGCCCACCTCCACCACCACCTCCTCCAATGTCTAGAGCCCCACCTCCACCTCCTCCTCCAATGCATGGAGCACCTCCACCTCCTGGTGGTCGAGGCCCCCCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCTCCTCCACCTCCTGGTGGTCGAGGCCCCCCTCCTCCGCCTCCTCCAATTCGTGGAGCACCACCTCCTCCTCCACCTCCTGGTGGTCGAGGCCCCCCTCCTCCACCTCCTCCAATGCATGGAGCACCACCTCCTCCTCCATCTCCTGGTGGTCGAGGGCCCCCTCCTCCGCCTCCTCCAGGTGGTAGAGGTCCACCTCCTCCACCTCCCCCCGGTGCTTCTCCTCTTAGACCTCCTGGTGGTGGTCCTCCACCACCTCCCGCGAATATTGGAGGAAGAGGGCGTGGATATGCACGCCCAGCAGGAGCTAGTTCAATGGCACCCCGGCGATCCAACCTAAGGCCTCTGCATTGGAATAAAGTTGCAAGGGTGGTGCAGGGAAGTTTGTGGGAAGAATTACAAAGAAATGGAGATCCTCAAATTGAACCAGATATTGATGTTTCAGAGCTAGAGAAGTTTTTCTCTGTGAATGTTCCCAAACCTGCTGATTCAGGTGGCAAATCTGGAGGACGACGCAAGTCTGTTGGATCTAAACCTGACAAAGTCCAATTGGTTGACCTAAGAAGGGCTAATAATACTGAAATAATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCTGTACTGGCTTTGGATGAGTCAGTACTAGATGTTGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAAGAGATGGAGCTTTTGAAGGGATACACTGGTGACAAGGAGAATTTGGGGAAGTGCGAACAGTTTTTTTTGGAGCTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTCGCTTTCAAAATCCAGTTTGGGTCTCAGGTTACTGAATTCAAGAAAAGTTTAAACACTGTGAACTCTGCCTGCGAAGAGGTCCGGAAATCTGTCAAACTGAAGGAGATTATGAAGAAAATTCTATTTTTGGGTAATACATTGAATCAGGGAACAGCAAGGGGATCTGCTGTTGGGTTCAAGTTGGATAGTCTTTTAAAGCTCACGGAGACTCGTGCTTCTAACAGTAGGATGACGCTGATGCACTATCTTTGCAAGGTCCTAGCTGAAAGGTCACCTGGACTCCTTGATTTTTATGTAGACCTTGTTAGCCTGGAAAGTGCCACTAAGATACAATTGAAGGCGTTAGCAGAAGAGATGCAGGCAATCATCAAAGGATTAGAAAAGGTTAAACAAGAGCTTGCTGCATCTGAAAATGATGGACCTGTGTCTGAAGGTTTCCGTAAGACATTGAAAGAATTCATAACAGTAGCCGAGTCAGAGGTGGCAGCTCTAACAAACCTATATTCTGTGGTGGGGAGAAATGCTGATGCACTTGCGCTATATTTTGGTGAGGATCCTGCTCGATGCCCACTTGAGCAAGTTACTGCAACTCTTTTTAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGACAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCCGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGAGTCGACTTGACAAAGAAGAGTGCAAAAGATGGATAA 4773 0.4655 MALFRRFFYRKPPDRLLEISERVYVFDCCFSADVLEEDEYRVYMGGIVTQLQDHFPDASFMVFNFREGMRRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGELKTLEMVYKQAPRELLHLLTPLNPQPSQFRYLQYISRRHLGSEWPPPETPLYLDCLILRVLPLFDDGKGCRPVIRVYGPDPSKPANRSSKLLFSTSESKKHVSHYLQAECMLVKIDIRCRVQGDVVLECIHLSEDSIREEMMFRVMFHTAFVRSNILILSHEEIDILWDFKDQFPKDFKAEVLFLDADAVIPDLNTVTVSGDANETESAETESASPEEFYEVDEIFSNVIDAQEGRAEDDSHAFTDNAMGDENHKEVWKEELEPHSFQDCTSNDGILKQADKTDSGISAVKDISIDDVNYKFNENMDSDPHVVKDIAVDDGEIKSTSTAVTSDMVKPLEMKEVTVDVHQESTVMENKCEDNEATEKELDSMAGEYMSDISKQKSGKPLPSTAKKQLPSNSKPVGDTLLTKQKTKQQETLGFQAKQAKPTAATKWIPSNKGSYINSMHVYYPPNRINSAPAALSNLTSSKEKIEDAKARSVSAPVVSASAVNTKSDMKTRKLAISKSAGHILAEVDAKRPSSPLPSIEETSLQSDTQVQQQSSDQVLQSPLPSPPPSPPHGDTTNSSSHVFKPLSLQDDVSPQASPSSLVTSSGGKGSIALSPPPPPPPPPTLASFTTQKVWVDLQLATSPPFSPPPPPPPPPFSGLNKRDSLHSTSPSISEVLTTVVPTRSPPPPPPPPLPPPRYEVPSIPPPPPPPPLTPSTTPPLEHGVPPMPPPPPPFPTSSIHKAPTPTPPALISSHTAPPAPPPPPLLANAQIPTLPLTTPPPPPPLPFNSAPPPPPPSPISRAPPPPPPPPFSSAPPPPPPPPPPPPLQGSAPAPPPPPPPPPFSSAPPPPPPPPFGRAPPPPLPPPFGRAPPPPPPPPFGRAPPPLGGGPPPPPPPPMSRAPPPPPPPMHGAPPPPGGRGPPPPPPPMYGAPPPPPPPGGRGPPPPPPPIRGAPPPPPPPGGRGPPPPPPPMHGAPPPPPSPGGRGPPPPPPPGGRGPPPPPPPGASPLRPPGGGPPPPPANIGGRGRGYARPAGASSMAPRRSNLRPLHWNKVARVVQGSLWEELQRNGDPQIEPDIDVSELEKFFSVNVPKPADSGGKSGGRRKSVGSKPDKVQLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQFFLELMKVPRVESKLRVFAFKIQFGSQVTEFKKSLNTVNSACEEVRKSVKLKEIMKKILFLGNTLNQGTARGSAVGFKLDSLLKLTETRASNSRMTLMHYLCKVLAERSPGLLDFYVDLVSLESATKIQLKALAEEMQAIIKGLEKVKQELAASENDGPVSEGFRKTLKEFITVAESEVAALTNLYSVVGRNADALALYFGEDPARCPLEQVTATLFNFIRLFRKAHEDNCKQAELEKKKAEKEAEMEKAKGVDLTKKSAKDG* 1591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2122 1590 MobiDBLite consensus disorder prediction 532 557 - -
Lja4g2122 1590 Gene3D Formin, FH2 domain 1175 1562 IPR042201 -
Lja4g2122 1590 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 1568 1590 - -
Lja4g2122 1590 SMART PTEN_C2_2 198 1288 IPR014020 -
Lja4g2122 1590 Coils Coil 506 526 - -
Lja4g2122 1590 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lja4g2122 1590 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1175 1576 IPR015425 -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 781 797 - -
Lja4g2122 1590 Pfam Formin Homology 2 Domain 1181 1550 IPR015425 -
Lja4g2122 1590 PANTHER FORMIN-J 1 794 - -
Lja4g2122 1590 PANTHER FORMIN-J 1094 1580 - -
Lja4g2122 1590 SMART it6_source 753 1589 IPR015425 -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 675 699 - -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 1228 1252 - -
Lja4g2122 1590 Gene3D - 205 336 - -
Lja4g2122 1590 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Lja4g2122 1590 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 199 336 IPR035892 -
Lja4g2122 1590 Coils Coil 1551 1580 - -
Lja4g2122 1590 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 713 749 - -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 889 1162 - -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 820 881 - -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 535 557 - -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 800 819 - -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 665 1183 - -
Lja4g2122 1590 MobiDBLite consensus disorder prediction 751 765 - -
Lja4g2122 1590 Coils Coil 1457 1484 - -
Lja4g2122 1590 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1138 1570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2122 Lja-Chr4 22761005 22775252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2122 1 638 FH2 protein (formin) Gene Family AT5G07740 61.420 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2122 - - lja:Lj4g3v1659950.2 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2122 4 22761005 22775252 Lja4g2122 4 22761005 22775252 ECH