Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2090 ATGTGTCCATGGGTTGTTATTGCCGTTGCCACCATTGTGGCAGCGATCCTCATTTCTCGGCTGTTGAATCTCATAACTCAACCCTCCTCCCCTCTCCCACCAGGGCCACGGCCATGGCCCATCGTCGGAAACTTCCCTCACATGGGCGCCGAACCGCACAAGGCCCTCGCCGCCTTGGCTGGCAAACACGGCCCTCTCATGCACCTGCGCTTGGGCTTTGTCCATGTAGTGGTGGCCGCTTCCGCCTCCGTGGCGGAGCAGTTCTTGAAGGTTCATGATGCCAATTTCTCCAGCCGCCCGCCGAACGCCGGCGCCAAATACATGGCCTATAACTACCAGGATCTTGTGTTTGCTCCTTACGGCCCGCGGTGGCGGTTGCTCCGGAAAATAACCAACCTCCACATGTTCTCTACCAAGGCTTTGGATGATTTCAGACACATGAGACAAGAAGAGGTAGCGAGATTGATACACAATTTAGCAAGTTCAGGGTCTAAAGCAGTAAACTTAGCACAAATGTTGAATGTGTGCACGACCAATGCATTGGCAAGGGCAATGATGGGACGGCGAGTTTTCGACGACGGCAAAGGTGGTTGTGATCCGAGGGCAGATGAGTTTAAGTCTATGGTGGTGGAACTTATGGTTTTGGCCGGAGTTTTCAATATCGGTGACTTTATTCCTCCCTTGGAGTGGTTGGACCTTCAAGGAGTGCAAGGCAAGATGAAAAAATTACACAACAGGTATGATGCATTTTTTGCCCACATTATTGAGGAGCAAAAGGTAATTTTGAAGAGTGAGAAGCAACAAGACTTGTTGAGTACTTTGTTGTCACTAAAAGAGGCTCCGGAGGATGGAGACAAACTCAATGATACTGAGATCAAAGCACTACTTTTGAATTTGTTCACAGCTGGGACAGACACATCATCAAGCACAGCTGAGTGGGCAATTGCTGAATTAATCAAGAACCCAAGAATCATGGGCCAAGTGCAACAAGAATTGGACAATGTTGTAGGCAAGGACAAGCTTGTGACTGAACTAGACATGCCCAACCTTCCTTACTTAGAGGCAGTGGTAAAGGAAACATTTCGTCTCCATCCATCAACCCCTCTTTCTCTCCCACGTGCTGCAGCAAAGAGTTGTGAGGTCTTCGACTACCATATCCCCAAAGGTGCAACTCTCTTGGTCAACGTTTGGGCCATATCACGTGACCCAAAGGAATGGGCCAGCCCTTTGGAGTTTAGGCCCGAAAGGTTCCTCCCGGGTGGTGAGAAGGCTAGTGTTGATATTAGGGGGACTGATTTTGAGGTGATTCCATTCGGTGCGGGGCGTAGAATATGTGCTGGTATGAATCTTGGCATTAGGATGGTTCAATTGCTCATTGCAACTTTGATTCATGCTTTTGATTGGGAGTTGGAGAATGGTATGAACCCCGAAAAGCTTAACATGGATGAAGCGTATGGGATCACATTGCAAAGAGTTGTGCCTCTTTCGGTGCACCCTCGCCCTAGACTTTCACCACATGTGTACTCTTCATAG 1533 0.4905 MCPWVVIAVATIVAAILISRLLNLITQPSSPLPPGPRPWPIVGNFPHMGAEPHKALAALAGKHGPLMHLRLGFVHVVVAASASVAEQFLKVHDANFSSRPPNAGAKYMAYNYQDLVFAPYGPRWRLLRKITNLHMFSTKALDDFRHMRQEEVARLIHNLASSGSKAVNLAQMLNVCTTNALARAMMGRRVFDDGKGGCDPRADEFKSMVVELMVLAGVFNIGDFIPPLEWLDLQGVQGKMKKLHNRYDAFFAHIIEEQKVILKSEKQQDLLSTLLSLKEAPEDGDKLNDTEIKALLLNLFTAGTDTSSSTAEWAIAELIKNPRIMGQVQQELDNVVGKDKLVTELDMPNLPYLEAVVKETFRLHPSTPLSLPRAAAKSCEVFDYHIPKGATLLVNVWAISRDPKEWASPLEFRPERFLPGGEKASVDIRGTDFEVIPFGAGRRICAGMNLGIRMVQLLIATLIHAFDWELENGMNPEKLNMDEAYGITLQRVVPLSVHPRPRLSPHVYSS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2090 510 Gene3D Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Lja4g2090 510 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 Pfam Cytochrome P450 33 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 SUPERFAMILY Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2090 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 500 - -
Lja4g2090 510 PANTHER FLAVONOID 3'-MONOOXYGENASE 8 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2090 Lja-Chr4 22457536 22465233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2090 9 509 Cytochrome P450 AT5G07990 62.891 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2090 K05280 - gmx:547475 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2090 4 22457536 22465233 Lja4g2090 4 22457536 22465233 ECH