Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2067 ATGTCTTCACCTCTCTGCTCCCTCTTCTTCCACCCACCTTCATGTCCAACCACTCTCACCTTCGATGTCCTTCTCGGCTTCCTCCTCCTCGCCGCCGTCTTCGGCTACTGGCTTGTTCCCGGTGGTCTTGCTTGGGCTCTGTCCAAAAACAGAGCAATTTCCAAAAACAGAGCATCTTCCAAAAACAGAGGAGCTTCATCTTCTTCTTCTTCTTCCATTCCTGGACCCTCTGGTTTCCCCCTGTTTGGCATGGTTTTTGCTTTCACAGGGACGACTCTGACTCACAGGGTTCTCGCAAAACTCGCAGGAGCCTTAAAGGCGAAAGCCTTAATGGCATTCTCTGTTGGGTTCACTCGTTTTGTGATCTCTTCTCACCCTGACACAGCGAAAGAGCTTCTCAATAGTTCTGCTTTCGCTGATCGACCTGTGAAGGAGTCTGCTTTTGAGCTTCTGTTTCACAGGGCAATGGGGTTCGCACCTTATGGTGAGTACTGGAGGAACCTGAGGAGAATCTCTGCAACCCACATGTTTTCTCCGAGGAAGATTGCATCCTTTGGGGATTTCAGGGCCAGGATTGGGGCACACATGGTGAGGGAGATTAAGGGGGTGATGGAGATGAAGGGTGAAGTGGAGGTGAGGGAGGTTTTGCATTTTGGGTCACTGAACAATGTGATGATGATGGTGTTTGGGAGGTGTTATGAGTTTGGTGAGGGTGGTGATGGGTGTGAGGTTGAGGAGCTGGTTAAGGAAGGGTATGATTTGCTTGGTGTTTTCAATTGGAGTGATCACTTTCCTCTGTTGGGTTGGATGGACTTGCAGGGTGTGAGGAAGAGGTGCAAGAATTTGGTGGCTAAGGTTAATGCTTTTGTTGGGAAAATCATATTGGAGCACAGGATGATAAGGGCTGCTGAAGGACAAGGTTGTGATGAGAGCTCTAGTGATTTTGTTGATGTGCTGCTGGATTTGGAGGAAGAGAACAAGCTTCAACACTCAGATATGGTAGCAATTTTGTGGGAAATGATCTTTAGGGGGACTGATACAGTAGCAATCCTTCTAGAGTGGATTCTTGCTAGAATGGTGATGCACCCTGAAATCCAAGCTAAGGCACAAGCTGAAATTGACTCTGTTGTTGACTCTGACCGCACTGTTTCTGACACTGATCTTCCAAACCTTCCTTACCTTCACGCCATAGTGAAGGAAACCTTGAGGATGCACCCACCAGGCCCTCTTCTTTCATGGGCTAGGCTCGCCATCCACGACACACATATTGGCAACCACTTCATCCCCGCCGGCACCACTGCCATGGTGAACATGTGGTCCATCACTCATGACCAAGATATTTGGCCTGATCCAGAAGAGTTCAAGCCAGAGCGTTTTCTGCTGCAGGGTGAAGATAATGTGCACATCATGGGTTCTGATCTTAGGCTCGCGCCTTTTGGTTCCGGAAGAAGGGTGTGCCCTGGTAAGGCCATGGGGTTGGCCACTGTGGAGCTTTGGCTTGCAATGTTGCTGCAGAGGTTTAAATGGATGGCTGCTGATGATTCTGGTGTGGACTTGTCTGAGTGCTTGAAACTCTCTTTGGAGATGAAAAACTCGCTGGTTTCCAAAGCTATTATGCGCAATCAAGAATGA 1632 0.4884 MSSPLCSLFFHPPSCPTTLTFDVLLGFLLLAAVFGYWLVPGGLAWALSKNRAISKNRASSKNRGASSSSSSSIPGPSGFPLFGMVFAFTGTTLTHRVLAKLAGALKAKALMAFSVGFTRFVISSHPDTAKELLNSSAFADRPVKESAFELLFHRAMGFAPYGEYWRNLRRISATHMFSPRKIASFGDFRARIGAHMVREIKGVMEMKGEVEVREVLHFGSLNNVMMMVFGRCYEFGEGGDGCEVEELVKEGYDLLGVFNWSDHFPLLGWMDLQGVRKRCKNLVAKVNAFVGKIILEHRMIRAAEGQGCDESSSDFVDVLLDLEEENKLQHSDMVAILWEMIFRGTDTVAILLEWILARMVMHPEIQAKAQAEIDSVVDSDRTVSDTDLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTHIGNHFIPAGTTAMVNMWSITHDQDIWPDPEEFKPERFLLQGEDNVHIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAMLLQRFKWMAADDSGVDLSECLKLSLEMKNSLVSKAIMRNQE* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2067 543 PANTHER CYTOCHROME P450 78A5 18 538 - -
Lja4g2067 543 SUPERFAMILY Cytochrome P450 73 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 Gene3D Cytochrome P450 58 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 Pfam Cytochrome P450 74 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PANTHER STEROID 21-HYDROXYLASE-RELATED 18 538 - -
Lja4g2067 543 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PRINTS E-class P450 group I signature 437 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PRINTS E-class P450 group I signature 219 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2067 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2067 Lja-Chr4 22237504 22240066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2067 20 540 Cytochrome P450 AT1G74110 64.650 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2067 K20619 - gmx:100811042 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2067 4 22237504 22240066 Lja4g2067 4 22237504 22240066 ECH