Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2047 ATGGCCCCTGATACTGTTCCTGGTGTTGAATCACCTCGGCGACGTTATGGTCTATTACGAGATCAAGTTCAACCAGTGAAAAGAAAGGACTCTGATCGCTATGAAATTGTTCCAATTCAAGATTCTCTGTCTTTTGAGAAAGGATTTTTCATAGTTATTCGTGCTTGCCAGTTGCTGGCTCAAAAGAATGATGGAATTATATTAGTAGGAGTTGCAGGCCCCTCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGATTCTCAATTTTATGCCAAGCATAGCTGTCATAACAATGGACAATTATAACGATGCTAGTCGAATCATAGATGGCAACTTCGATGACCCCCGGTTGACGGATTATGATACCTTGCTAGAAAATATACAGGGTCTTAAAGCAGGGAAGTCTGTCCAGGTTCCAATATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGACTGTTGAAGTCCCTAGCTCCCGTATTGTAATTGTTGAAGGCATATATGCCTTAGGTGAAAAATTAAGGCCTTTGCTTGATCTTCGTGTTTCTGTCACTGGTGGAGTTCATTTTGACCTCGTCAAGCGCGTTTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCCATGTATAAAGCTTTTATAGAGCCAGATCTCCAAACAGCACATATAAAAATTATTAACAAGTTTAATCCATTCTCTGGTTTCCAGAATCCCAGCTACATATTGAAGTCAGCTAGGGCTGTTACAGTAGATCAAATCAAGGCAGTTATTGCCGCAGAGCATACTGAGACAAAAGAGGAAACATACGACATATATCTTCTACCCCCTGGGGAAGACCCTGAAGCATGTCAATCATATTTAAGGATGAGAAACCGTGATGGCAAGTACAATCTAATGTTTGAGGAATGGGTTACAGATAGTCCATTCATAATATCCCCTAGAATTACTTTTGAGGTCAGCGTGCGCCTGCTTGGAGGGTTGATGGCCTTGGGGTACACAATTGCAGCTATCCTGAAAAGAAGCAGCCATGTCTTTCATGATGATAAAGTGTCCATAAAAACTGATTGGCTAGAACAACTTAATCGTTTATATGTTCAGGTGCAAGGGAAGGATAGAAACTATGTTAAATTTGTGGCAGAGAAACTGGGGTTGGATGGTTCATATGTTCCACGCACGTACATTGAACAAATTCAGCTGGAAAAGCTTGTAAATGATGTGATGGCACTGCCAGCTGATCTAAAGACAAAGTTCAACATAGATGATGAGATGGTTTCAAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAACGAAGTACCTTAATCGTGGTATTTCACAATCATTTTCAAATCGAAGGGACAAGATTCTGCCTAATTTGACTAAACTTGCTATAAATAACACACGATTTGATGGGAGAGCTCTAGACTCACCTGCACCGATTGCTAACCAAGGAGTTATCACTCAGCTTTCTGATCAAATTTCTACATTGAATGAAAGAATGGATGAGTTCACCTCCCGTATTGAAGAGCTGAATTCAAAGTTTGCTATCAGCAAAGTCTCAGCCAGTCAACAAAACTTGGCTTTACAGGCTGAGGTCTGCAATGGCTCTGGCCCCACTTCTCTCTTTGTATCTGGATTAGGAAATGGTTCATTGGCTGGACCATTGCTACCTAATTCTTCATCATGCTCTCAACTGGCTAGAGAGTCTCCCCTGATGGAAGAGGTATTACTTGTTGCTCGAGGGCAACGTCAACTCATACATCAACTAGACACTCTGAGCAATCTTTTGCATGAATACTTTGGAGAAAGGTCACGGCAGGACAGAACAGAGCAGAGACGAATGGGTGAAATTGAATCCATTGCCATCCCTGTGGTTTTGACTCTGGCCATTGGTGCTGTTGGTGTGTTCTTGTTTAAGGGTTTGTCATCTTAA 1977 0.4188 MAPDTVPGVESPRRRYGLLRDQVQPVKRKDSDRYEIVPIQDSLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKILNFMPSIAVITMDNYNDASRIIDGNFDDPRLTDYDTLLENIQGLKAGKSVQVPIYDFKSSSRIGYRTVEVPSSRIVIVEGIYALGEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPSYILKSARAVTVDQIKAVIAAEHTETKEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFHDDKVSIKTDWLEQLNRLYVQVQGKDRNYVKFVAEKLGLDGSYVPRTYIEQIQLEKLVNDVMALPADLKTKFNIDDEMVSSPKEALSRASADRRTKYLNRGISQSFSNRRDKILPNLTKLAINNTRFDGRALDSPAPIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFAISKVSASQQNLALQAEVCNGSGPTSLFVSGLGNGSLAGPLLPNSSSCSQLARESPLMEEVLLVARGQRQLIHQLDTLSNLLHEYFGERSRQDRTEQRRMGEIESIAIPVVLTLAIGAVGVFLFKGLSS* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2047 658 Gene3D - 255 414 - -
Lja4g2047 658 PANTHER URIDINE-CYTIDINE KINASE C-LIKE ISOFORM X1 7 648 - -
Lja4g2047 658 Coils Coil 501 528 - -
Lja4g2047 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 237 IPR027417 -
Lja4g2047 658 PRINTS Uridine kinase signature 189 199 - -
Lja4g2047 658 PRINTS Uridine kinase signature 133 148 - -
Lja4g2047 658 PRINTS Uridine kinase signature 66 83 - -
Lja4g2047 658 PRINTS Uridine kinase signature 225 238 - -
Lja4g2047 658 SUPERFAMILY CYTH-like phosphatases 261 408 IPR033469 -
Lja4g2047 658 Gene3D - 67 246 IPR027417 -
Lja4g2047 658 Pfam CYTH domain 273 405 IPR023577 -
Lja4g2047 658 Pfam Phosphoribulokinase / Uridine kinase family 69 237 IPR006083 GO:0005524|GO:0016301
Lja4g2047 658 CDD UMPK_like 68 240 - -
Lja4g2047 658 ProSiteProfiles CYTH domain profile. 249 411 IPR023577 -
Lja4g2047 658 PANTHER URIDINE KINASE 7 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2047 Lja-Chr4 21856146 21863571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2047 67 339 PRT Gene Family AT5G40870 25.795 1.80e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2047 K00876 - gmx:100803122 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2047 4 21856146 21863571 Lja4g2047 4 21856146 21863571 ECH
Lja4g3593 4 67150722 67172566 Lja4g2047 4 21856146 21863571 PCT