Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2031 ATGGAGATTTCCGCCATGGCTTCACCATCTCCAAGACCTTCTCTTCCAACCACCACTCCTCACAGAGTCAGCACCTTCTGCATGCTTCCTCAGCTGAGACGCTCCCACATATCACTACCAACCTCAACCACCATTTCACTCCTCGCTCTCTTCGCCCCTCCCAATGAAGCCAAAGCAATTTCCAAGGACCAGATTGTCTCTTCACTCACCCAAGTGGAGAAAACATTCGATCAGGTTCAGGAGGTGGGTTCAGGTTTCTTTGACACGGCTCAGCGTGTTGCTGAAACGGTAGGGAATGCTTTGAAGCCAGGCTTCGACACAGCGTTGCCGATTGTGCAGCAGGCCGGGGAAGAGGCCTTGAAATTTGCTTCTCCTGCCTTCTCTGAAGCTTCAAAGAAGGCCCAAGAAGCACTTCAAAGCACTGGTGTTGATACAGAACCTGTTTTCAGTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACTACCAAGGTGATTGAAGGTGCCAAGCCAATAGCTTCATCCACCATGGAAACCATATCTTCTTCAGATCCGATTGTGATTGCTGGAACAGCTGGAGCTCTAGTTATTGCATACCTCCTGCTTCCTCCTATATTCTCTGCCATCTCCTACAATTTTCGTGGCTACAAAGGAGACCTGACAGCAGCTCAAACACTTGATCTGGTATCTACACAAAACTTCATTATCATTGACATTAGGTCAGAGAAGGATAAGGACAAGGCCGGTATCCCTCGCCTTCCCTCTAGTGCTAAAAACAAGATGGTTGCCATTCCTTTGGAAGAACTGCCAAGCAAGCTCAGAGGACTGGTCAGGAATGTGAAGAAAGTGGAAGCTGAAATAGCAGCTTTGAAGATTTCATATCTCAAGAAGATCAACAGAGGCACCAATATTGTGATCTTGGACTCGTACTCAGACTTGGCAAAAATAGTTGCAAGGACACTTACCAATCAAGGTTTTAAGAACACATGGATCGTTGCTGATGGTTTTTCTGGAGGCAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCATATAACTTTTCGTTTGCAGAGGTTCTGTCACCATCCAGAGTCATCCCTGCAGCTGTCAGAAGTTTTGGGACAACATCTAGCAGGAAACTTCTTCCTGGGGCTGAATGA 1161 0.4694 MEISAMASPSPRPSLPTTTPHRVSTFCMLPQLRRSHISLPTSTTISLLALFAPPNEAKAISKDQIVSSLTQVEKTFDQVQEVGSGFFDTAQRVAETVGNALKPGFDTALPIVQQAGEEALKFASPAFSEASKKAQEALQSTGVDTEPVFSAAKTVADAAQQTTKVIEGAKPIASSTMETISSSDPIVIAGTAGALVIAYLLLPPIFSAISYNFRGYKGDLTAAQTLDLVSTQNFIIIDIRSEKDKDKAGIPRLPSSAKNKMVAIPLEELPSKLRGLVRNVKKVEAEIAALKISYLKKINRGTNIVILDSYSDLAKIVARTLTNQGFKNTWIVADGFSGGKGWLQSRLGTDSYNFSFAEVLSPSRVIPAAVRSFGTTSSRKLLPGAE* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2031 386 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 383 IPR044690 GO:0009704|GO:0071277|GO:0090333
Lja4g2031 386 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 3 383 - -
Lja4g2031 386 CDD RHOD 224 338 - -
Lja4g2031 386 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 196 338 IPR036873 -
Lja4g2031 386 Coils Coil 273 293 - -
Lja4g2031 386 Gene3D - 218 356 IPR036873 -
Lja4g2031 386 ProSiteProfiles Rhodanese domain profile. 230 351 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2031 2 309 Sulfurtransferasese or Rhodanese AT5G23060 68.269 2.21e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2031 - - gmx:100813363 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2031 4 21399584 21403147 Lja4g2031 4 21399584 21403147 ECH