Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2020 ATGGCTCGTTTCTTCAAAGCCTCACACCCCATTTTCCTATGCTTCATTCTTCTCTGTTGCTTCCATGTTTCCCTCATCAATTGCTCTGAGTTTGAAGTTGGTGGACATGATGGTTGGGTTGTCCCCAAATCAAAGGACAATGAAGACATCTACAACCAATGGGCATCACAGAACAGATTCAAAGTTAATGATACTGTTCGTTTCAAGTATGAGAAAGACTCTGTTTTGGTGGTGAGTGAAGAAGAGTATGAAAGGTGCAAATCCTCTCGTCCACTGTTTTTCTCCAACAATGGTGACACTGTCTTCAAATTTGACCGGCCAGGCACCTTCTTCTTCATTAGTGGGGTTAGTGGTCACTGCACCAGAGGGCAGAAGCTGATAATCAAGGTTTTGAATGTGGAGGAGCCAGCAGCACCATCACCCCAATCTGCAGATGACACTGCCCAAACACCAAGGGCTAAAAGTGGAGTTGCTGAAATGAGTCCTCCGAGTTTCACAACATGGACATTTTTTGTTGTGTCACTCTTTGGCCTGGTATATGCTTGA 546 0.4469 MARFFKASHPIFLCFILLCCFHVSLINCSEFEVGGHDGWVVPKSKDNEDIYNQWASQNRFKVNDTVRFKYEKDSVLVVSEEEYERCKSSRPLFFSNNGDTVFKFDRPGTFFFISGVSGHCTRGQKLIIKVLNVEEPAAPSPQSADDTAQTPRAKSGVAEMSPPSFTTWTFFVVSLFGLVYA* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2020 181 Pfam Plastocyanin-like domain 49 124 IPR003245 GO:0009055
Lja4g2020 181 Gene3D - 28 135 IPR008972 -
Lja4g2020 181 PANTHER EARLY NODULIN-LIKE PROTEIN 5 10 146 - -
Lja4g2020 181 ProSiteProfiles Phytocyanin domain profile. 29 132 IPR003245 GO:0009055
Lja4g2020 181 MobiDBLite consensus disorder prediction 137 159 - -
Lja4g2020 181 CDD OsENODL1_like 30 131 IPR041846 -
Lja4g2020 181 PANTHER BLUE COPPER PROTEIN 10 146 IPR039391 GO:0009055
Lja4g2020 181 SUPERFAMILY Cupredoxins 29 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2020 Lja-Chr4 20969508 20970519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2020 7 179 Phytocyanin Superfamily AT1G48940 48.864 3.33e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2020 - - gmx:102667643 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2020 4 20969508 20970519 Lja4g2020 4 20969508 20970519 ECH