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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lja4g2007
ATGTTTTCCTCAAATAGTTCCCTCAATGGAAATGACCTAATCTCCTCATCCTCCTACCCTAACAACAACCAAGCATTTATTTTCTCTAGGCATTTTTCCTTTGAAAGCAACCTCACTTCAAAAGATGAAACCAATTGTCCTTTGTCCTTACTTCAATTCCCCTATTCTCCCTTTGAAGACCATGAAAATATCTTCCCTGAACAACACCATGATTTCTCACTCCAACAACATCAATCTCTACCTGAGCCTGTTGTGAACAACAATATGGATGCTTCAATCAACAACAACAAGAATAATAGTATTCCTGGAACCTGCTCCGTTGTAGGAAAAGGCACTGCAACGGAGCAGGTTGCGGTGAGAAGAAGATCTAGCAAGAGGGATCGGCACAGCAAGATCAACACGGCTCGAGGACTCAGGGATCGGAGAATGAGACTTTCACTTGAAGTTGCCAAGAGGTTCTTTGGCCTTCAAGACATGCTGGGCTTTGATAAAGCAAGCAAAACTGTGGACTGGTTGCTGAACCAAGCAAAAGTTGAAATTAAGCACCTTGCAAGGGAGAAGAATCTCCACCACCCAAGTTGTAGTGGCGCCAAGAGCAGTTCTTCAACTTCTGAGGGTGAAGGGGTGTCTGGCTTGGATGAGGTTGTGATTAGTGAAAATCAAGAGCAAGAGAAGGAGCAACAACCAATAGTGAAGAGGAGAGCTAACAAGGTTTGTAGAAAGAGTGCATTCAATGCTATTGGGAGGGAAAAGGCAAGGGAAAGGGCAAGAGAAAGAACAAGAGAAAAGCTGAGGACTAAGAAGCTAGCTGATGATAAAGAATCAAAGCAATGCAAGGAGGTAACAAACCATAACCTGAACTTGTGGAATCCCTTTGAAACTGTGGAAGAATCTGCAGGCACCCACCAGAGCCAAAGTGTGAATAATCATCCCTCCTTGGATCTTCTGGCTGAGGCTGAAAAAGAACCAAGTTCTCAAGCAAAGGAGAATTCAGGAACTGTTGTAGATGATGATATGTCTCATGAAGATTCCTTCTTGATTATGAGCAAATGGAGTCCAACCATGATCCTTTCTTATTTACTACATGGTACAAATTCATTTGTCTTACAATTAATGTCATATGGATTTTTTTCTATTAAGAAACATAACCAATTGAATCTCTTTTCCAACTTCGGTTGGATATGCATTAATTGTGTACCAGCTTTAACATTTTAG
1215
0.4148
MFSSNSSLNGNDLISSSSYPNNNQAFIFSRHFSFESNLTSKDETNCPLSLLQFPYSPFEDHENIFPEQHHDFSLQQHQSLPEPVVNNNMDASINNNKNNSIPGTCSVVGKGTATEQVAVRRRSSKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHLAREKNLHHPSCSGAKSSSSTSEGEGVSGLDEVVISENQEQEKEQQPIVKRRANKVCRKSAFNAIGREKARERARERTREKLRTKKLADDKESKQCKEVTNHNLNLWNPFETVEESAGTHQSQSVNNHPSLDLLAEAEKEPSSQAKENSGTVVDDDMSHEDSFLIMSKWSPTMILSYLLHGTNSFVLQLMSYGFFSIKKHNQLNLFSNFGWICINCVPALTF*
405
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lja4g2007
404
MobiDBLite
consensus disorder prediction
193
208
-
-
Lja4g2007
404
ProSiteProfiles
TCP domain profile.
125
183
IPR017887
-
Lja4g2007
404
MobiDBLite
consensus disorder prediction
189
210
-
-
Lja4g2007
404
PANTHER
TRANSCRIPTION FACTOR TCP4-RELATED
52
349
IPR005333
GO:0003700
Lja4g2007
404
ProSiteProfiles
R domain profile.
246
263
IPR017888
-
Lja4g2007
404
Pfam
TCP family transcription factor
124
265
IPR017887
-
Lja4g2007
404
PANTHER
TRANSCRIPTION FACTOR TCP18
52
349
-
-
Lja4g2007
404
MobiDBLite
consensus disorder prediction
250
277
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lja4g2007
Lja-Chr4
20765754
20767695
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lja4g2007
121
266
TCP Transcription Factor Family
AT3G18550
44.304
5.20e-26
107
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
TCP
Lja4g2007
TCP
2.3e-42
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lja4g2007
-
-
gmx:100803669
319.316
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lja1g5397
1
90386529
90387482
Lja4g2007
4
20765754
20767695
ECH
Lja1g2670
1
31484929
31486838
Lja4g2007
4
20765754
20767695
ECH
Lja2g3166
2
67837402
67840198
Lja4g2007
4
20765754
20767695
ECH
Lja4g2007
4
20765754
20767695
Lja4g2007
4
20765754
20767695
ECH
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