Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1976 ATGGAGGAGCTATTGTCATGGCTTAAGCTCCTTTCTATCTCTTTCATTCTCCTCATTTTTTTCCTCAAGGCTTTAATCTTGCTCTGGTGGAGTCCAAGAAAAATTGAAGGCCATTTCTCCAGACAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGAAATGTTAGAGAACTTGTGGGGATGATGTTGAAGGCTTCTTCTCAACCTATGCCTTTCTCTCACAACATTCTCCCTAGAGTACTCTCCTTCTACCATCACTGGAAGAAAATTTATGGTTCAACATTCCTAGTTTGGTTTGGACCCACTTTTCGTCTCACAGTCTCTGATCCAGACCTCATTAGAGAAATCTTCACATCCAAGTCAGAATTTTATGAAAAAAATGAAGCTCCCCCACTTGTGAAGCAGCTAGAAGGTGATGGGCTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACAGAAAAATAATATCACCCACTTTTCACATGGAAAATCTCAAATTGCTGGTGCCGGTGATGGCAACAAGCGTGGTGGAGATGTTGGAGAAGTGGGCTGCAATGGGTGGCGAAAAGGGTGAGGTGGAAATAGAAGTTTCTGAGTGGTTTCAAACTCTAACAGAAGATGTTATCACTAAGACCGCGTTTGGAAGCAGCTACGAAGATGGCAAAGCCATTTTCCGCCTTCAAGCCCAACAAATGGTCTTAGCTGCTGATGCTTTTCAAAAAGTTTTCATTCCAGGTTACAGATTCTTTCCCACAAGGAGGAATATAAAGTCTTGGAAACTGGACAAGGAAATTAAGAAATCACTAGTGAAGCTTATTGAAAGAAGGAAGGAGAATTCATGTGGAGTGGAAAAAGGACCAAAAGATTTGCTTGGGTTAATGATTCATGCCTCCAATACCAGCTCCTCCAATGTCACAGTATATGACATTGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGCAAACAGACCACATCCAACCTGCTGACGTGGACAACCATTCTCCTTGCTATGCACCCACATTGGCAGGTACAGGCACGTGAGGAGGTCCTCAAGATGTGCGGAGCACGTGACCAGCCCACCAAAGATCATGTTGTCAAGCTCAAGATGCTGAGCATGATTGTGAACGAATCTCTAAGACTGTACCCGCCTACAATCGCCACAATCCGACGGGCGAAAAAGGACGTGGATCTAGGTGGCTACAAGATACCACGTGGGACCGAGCTCTTAATTCCAATCCTGGCCGTTCATCACGATCAAGCCATATGGGGTAACGATGTGAACGAATTCAATCCTGGCCGTTTCTCTGAAGGTGTGGCCCGCGCAGCGAAGCATCCTGTGGCGTTCATACCTTTTGGCCTCGGTGTGCGCACATGCATAGGACAAAACCTCGCAGTGCTGCAAACAAAACTGGCCCTGGCAATGATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCATGCACCAACGGTTCTGATGCTACTTTACCCTCAGTACGGTGCTCCAATCATTTTCCAACATTTGTCAACACTTGATGATTCTCCTCATCAAGGGTCCTCATAG 1575 0.4565 MEELLSWLKLLSISFILLIFFLKALILLWWSPRKIEGHFSRQGIRGPPYRFFIGNVRELVGMMLKASSQPMPFSHNILPRVLSFYHHWKKIYGSTFLVWFGPTFRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLVPVMATSVVEMLEKWAAMGGEKGEVEIEVSEWFQTLTEDVITKTAFGSSYEDGKAIFRLQAQQMVLAADAFQKVFIPGYRFFPTRRNIKSWKLDKEIKKSLVKLIERRKENSCGVEKGPKDLLGLMIHASNTSSSNVTVYDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPHWQVQAREEVLKMCGARDQPTKDHVVKLKMLSMIVNESLRLYPPTIATIRRAKKDVDLGGYKIPRGTELLIPILAVHHDQAIWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAMILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQHLSTLDDSPHQGSS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1976 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Lja4g1976 524 Pfam Cytochrome P450 82 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 SUPERFAMILY Cytochrome P450 46 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PANTHER CYTOCHROMEA2 5 507 - -
Lja4g1976 524 Gene3D Cytochrome P450 29 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g1976 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1976 Lja-Chr4 20268003 20272771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1976 2 517 Cytochrome P450 AT2G26710 77.863 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1976 K15639 - gmx:100780027 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1976 4 20268003 20272771 Lja4g1976 4 20268003 20272771 ECH