Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1938 ATGAATGTAAAATTATGCTGCCTAATGATTTTGGTGATGGCATTGGCAGTACATGCCCAACTAAAAACAGGGTTTTATTCTAGTTCATGTCCAAGTGCTGAGACCATCATACGGTCCACAGTTGTATCCTACTTCAACAAAGATCCTACCATTGCTCCTGGACTGCTCAGGCTTCATTTCCATGATTGCTTTGTCCAGGGCTGCGATGGTTCAATTCTGATTGCAGGCTCTTCTGCAGAGAGGAATGCATTGCCAAACCTTGGCCTAAGAGGTTTTGAAGTGATTGATGATGCAAAATCTCAATTAGAGGCCAAATGTCCTGGTGTTGTTTCATGTGCTGATATCCTAGCATTGGCAGCACGAGATGCTGTTGATTTGAGTGATGGCCCAAGTTGGCAAGTACCCACAGGAAGAAGAGATGGGAGGGTTTCCTTATCATCTCAAGCCTCCAACATGCCTTCTCCACTTGATCCTGTTTCTGTCCAGAGGCAAAAATTTGCTGCCAAAGGTCTAGATGATCATGACCTTGTCACCTTAGTTGGTGCACACACCATAGGCCAAACAGATTGCAGATTCTTCAGCTACCGATTATACAACTTCACCACCTCTGGCAATGCAGATCCTTCTATAAGCCTAGCTTTCTTATCCCAGCTCCAAGCACTTTGTCCAAAAAATGGAGATGGGTTGAGAAAGGTGGCATTGGATAAAGGTAGTGCAGCCAAATTTGATGTTAGTTTCTTCAAGAATGTGCGTGATGGTAATGGGGTGCTAGAGTCTGATCAGAGGCTGTGGGAAGATTCTGCTACTAGAAGTGTGGTCCAAAATTATGGTGGCAACATTAGAGGGTTACTTGGGTTGAGATTTAATTTTGAGTTTCCAAAGGCTATGATCAAGATGAGTAGTGTGGAGGTGAAGACTGGGAGTCATGGTGAGATTAGAAAAGTGTGCTCAAAATTTAATTGA 963 0.4361 MNVKLCCLMILVMALAVHAQLKTGFYSSSCPSAETIIRSTVVSYFNKDPTIAPGLLRLHFHDCFVQGCDGSILIAGSSAERNALPNLGLRGFEVIDDAKSQLEAKCPGVVSCADILALAARDAVDLSDGPSWQVPTGRRDGRVSLSSQASNMPSPLDPVSVQRQKFAAKGLDDHDLVTLVGAHTIGQTDCRFFSYRLYNFTTSGNADPSISLAFLSQLQALCPKNGDGLRKVALDKGSAAKFDVSFFKNVRDGNGVLESDQRLWEDSATRSVVQNYGGNIRGLLGLRFNFEFPKAMIKMSSVEVKTGSHGEIRKVCSKFN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1938 320 Gene3D Peroxidase, domain 2 153 299 - -
Lja4g1938 320 CDD secretory_peroxidase 20 319 IPR033905 GO:0004601|GO:0042744
Lja4g1938 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Lja4g1938 320 Gene3D - 24 320 - -
Lja4g1938 320 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 ProSiteProfiles Plant heme peroxidase family profile. 20 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 SUPERFAMILY Heme-dependent peroxidases 20 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 MobiDBLite consensus disorder prediction 131 158 - -
Lja4g1938 320 Pfam Peroxidase 38 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 PANTHER PEROXIDASE 25-RELATED 9 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g1938 320 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Lja4g1938 320 PANTHER PEROXIDASE 9 318 - -
Lja4g1938 320 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1938 Lja-Chr4 19848695 19851130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1938 4 320 Peroxidase AT2G41480 70.186 7.39e-176 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1938 K00430 - gmx:100816487 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1938 4 19848695 19851130 Lja4g1938 4 19848695 19851130 ECH