Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1937 ATGGACACTATTGCTGCAACTATTGCCTTCCTGCTGTTGATGTCCTCATCAGCAGCAGCTATAAGAGCTGAAACACAACCACCAAAGCAGAAAGTAACACTTGGCACCTCACTTTCCACCAATGGTACTCCATGGCTTTCCCCTTCCCACCTCTTTGCATTTGGCTTTTATAAGCATGACCGTGGATTTTTCCTTGGAATTTGGTTGGTTAGCACGGTGGAGGAAACAGTGGTATGGACTGCAAACCGAGATGATCCTCCTGTGACCTCAAATGCAAATCTACAACTTACAGTTGATGGTAAGCTAATACTAATAGAGAAAGGACAAGAGAAGCTTATTGCTAAATCTAATGGAACAGCTTCCTTTGCCTCCATGCTTGATTCTGGGAACTTTGTACTGTACAACAATAACTCCCAGGTCGTATGGCAGAGTTTTGATCACCCAACGGATACTATGTTGGGGGGTCAATCTCTGCCTTGTGGAGGTCAACTGTTCTCTAGTTTATCAGGGACTAACCCCTCAACTGGAAGGTTTCGACTCAAGATGCAGGATGATGGAAATCTTGTTCTGTATCCAGCAAACACTACGGACACAGCAAGGGATGCTTACTGGGCCACTGGTACTGATGACCGTCATGGTTCTCCCAAGAATCGCCTTTACCTTAACAACACAGGTTTACTGCAGATCAGGAATAGAAGTGATTCGAACATTAAAGATCTTCATATGCTTGGTGGTTCAAATTTGGCTAATAGGAGCCAGAACATTTATCGTGCAACCCTGGAATTTGATGGGGTTTTACGGCTGTATGCTCATGTTTACAATGGCAGTGGCAAAAAAATCGCATTGTGGCCGGATGGCAGTGCATGTCAAGTAAAGGGTTTTTGTGGCTTCAACAGCTACTGCACATTCAATGACGACCAACCAGTGTGCAATTGTCTTGCAGGGTTTGAATTCAAAGATGCAAATCAAGAGACACTTGGCTGCCAAAGGAACTCATCAAAAGCTGAGTGTACAAGTGAGAAAGACAGTTTAGCCCATTATAACATGGCCTTGATGAACAATATTGAATGGGAGGATCATCCTTATTTCGAGGCTGAGATGTCAGAGGAAGAAGAATGCTCCTCTGCATGTTTGGCAGATTGCAGCTGTTGGGCTGCACTGTATCAAAAAAATAGATGCAAGAAACATGGGCTGCCTTTGAGATATGTCAAAAGGACAGGGCTAGATGAACCTGTCCCACCCATGGCATTCTTAAAAGTGGGAAACAGCAGCCTCACAAACCAAAAACCTATATCAACACAACCAGCACCTCTAATCCAGAGTTCAAGTAACAAAGCAGTGGTGCATGTAATTGTTGTCATATTGATATTTACATTGTTTTTATGTTCAATGATTGCAATCTCCAGCCATTACATGTACAAAATTAGAGTATTAAGCTACAAAAGGCTGGCAGAGACTTGGAACTTGGGTTTGAATGAAGAGGTAGCTCTGAGAAGGTTTTCATACAATGAGCTTAAAAGGGCAACTAATCATTTCAAAGAAGAGTTGGGTAAGGGCTCTTTTGGAGCAGTTTACAAGGGGGCCTTATACAAAGGTAGGAGACTGATTGCAGTGAAGAGGCTAGAGAAGTTAGTGGAAGAAGGAGAAAGGGAGTTTCAAGCAGAGGTGCGGGCCATCGGAAAAACCCACCACAGGAACCTGGTTCGGTTGCTGGGATTTTGTGCTGAAGGTTCCAAAAGACTTCTGGTTTATGAATACATGAGCAACGGTTCACTTGGGCAGCTTATCTTTGGTGATCAAAGACGTCCAGATTGGGAGGAGAGAGTAAGAATAGCACTGAACATTGCAAGAGGGATCCTCTATCTCCATGAAGGATGTGAGGCACCAATCATTCATTGTGACCTCAAGCCTCAAAACATTTTGATGGATGAGTTTTGGACTGCCAAGATATCTGATTTTGGGCTGGCAAAACTTCTAATGCCAGATCAAACCAGAACCTTCACAGGGGCTAGAGGGACAAGAGGGTACATGGCCCCAGAGTGGAACAAGAACACCCCAATATCAGTGAAGGCAGATGTTTACAGCTATGGAATTGTGCTGTTGGAAATTTTATGCTGCAGAAGAAACATCGAAATTAATGTCTCAGAACCTGAGGAGGTTCTTCTCTCTGGTTGGTCCTATAAGTGCTTTGTAGCTAAAGAGTTAAATAAGCTTGTTCCTTGGGAAGCCATAAATAAAAATGTTCTGGAAAATATGGTTAAGGTGGCACTTTGGTGTATCCAAGATGAACCTGTTCTCAGGCCAGCAATGAAGAGTGTGGTGTTGATGTTAGAAGGGATTACTGACATAGCAATTCCTCCTTGCCCAAATTCAAGTTCTATGTGA 2385 0.4335 MDTIAATIAFLLLMSSSAAAIRAETQPPKQKVTLGTSLSTNGTPWLSPSHLFAFGFYKHDRGFFLGIWLVSTVEETVVWTANRDDPPVTSNANLQLTVDGKLILIEKGQEKLIAKSNGTASFASMLDSGNFVLYNNNSQVVWQSFDHPTDTMLGGQSLPCGGQLFSSLSGTNPSTGRFRLKMQDDGNLVLYPANTTDTARDAYWATGTDDRHGSPKNRLYLNNTGLLQIRNRSDSNIKDLHMLGGSNLANRSQNIYRATLEFDGVLRLYAHVYNGSGKKIALWPDGSACQVKGFCGFNSYCTFNDDQPVCNCLAGFEFKDANQETLGCQRNSSKAECTSEKDSLAHYNMALMNNIEWEDHPYFEAEMSEEEECSSACLADCSCWAALYQKNRCKKHGLPLRYVKRTGLDEPVPPMAFLKVGNSSLTNQKPISTQPAPLIQSSSNKAVVHVIVVILIFTLFLCSMIAISSHYMYKIRVLSYKRLAETWNLGLNEEVALRRFSYNELKRATNHFKEELGKGSFGAVYKGALYKGRRLIAVKRLEKLVEEGEREFQAEVRAIGKTHHRNLVRLLGFCAEGSKRLLVYEYMSNGSLGQLIFGDQRRPDWEERVRIALNIARGILYLHEGCEAPIIHCDLKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGARGTRGYMAPEWNKNTPISVKADVYSYGIVLLEILCCRRNIEINVSEPEEVLLSGWSYKCFVAKELNKLVPWEAINKNVLENMVKVALWCIQDEPVLRPAMKSVVLMLEGITDIAIPPCPNSSSM* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1937 794 ProSiteProfiles Bulb-type lectin domain profile. 29 146 IPR001480 -
Lja4g1937 794 Gene3D - 148 287 IPR036426 -
Lja4g1937 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 164 IPR036426 -
Lja4g1937 794 ProSitePatterns Protein kinases ATP-binding region signature. 516 539 IPR017441 GO:0005524
Lja4g1937 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 172 271 IPR036426 -
Lja4g1937 794 ProSiteProfiles Bulb-type lectin domain profile. 149 281 IPR001480 -
Lja4g1937 794 Gene3D Transferase(Phosphotransferase) domain 1 587 784 - -
Lja4g1937 794 Pfam S-locus glycoprotein domain 249 318 IPR000858 GO:0048544
Lja4g1937 794 SMART serkin_6 510 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1937 794 Gene3D - 25 146 IPR036426 -
Lja4g1937 794 SMART blect_4 36 148 IPR001480 -
Lja4g1937 794 SMART blect_4 149 279 IPR001480 -
Lja4g1937 794 ProSiteProfiles Protein kinase domain profile. 510 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1937 794 Pfam D-mannose binding lectin 76 158 IPR001480 -
Lja4g1937 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Lja4g1937 794 PIRSF SRK 1 794 IPR024171 GO:0004674
Lja4g1937 794 Coils Coil 538 558 - -
Lja4g1937 794 Pfam Protein kinase domain 512 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1937 794 CDD STKc_IRAK 516 780 - -
Lja4g1937 794 SUPERFAMILY Protein kinase-like (PK-like) 495 778 IPR011009 -
Lja4g1937 794 PANTHER RUST RESISTANCE KINASE LR10-RELATED 25 792 IPR045874 GO:0004672
Lja4g1937 794 Gene3D Phosphorylase Kinase; domain 1 477 586 - -
Lja4g1937 794 CDD B_lectin 37 148 IPR001480 -
Lja4g1937 794 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 25 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1937 Lja-Chr4 19836780 19839530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1937 499 787 Receptor kinase-like Gene Family AT5G20050 40.323 2.61e-64 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja4g1937 Pkinase 9.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1937 - - ahf:112707609 1023.85