Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1864 ATGGGTGCAGTCCTTCTCCCAGATCTCGGAACCGAGATTTTAATTCCCGTCTGCGCCGTCATTGGAATCGTCTTCGCTCTCTTCCAGTGGTTCCTCGTCTCCAAGGTTAAGATCACCGCCGCCACTAGAGACGCCGCTTCCCCCGACGCCGCCGGTAAGAATGGCTACAACGATTACCTCATCGAGGAAGAGGAAGGTATCAACGACCAGAACGTTGTTCTCAAATGCGCTGAAATCCAGCAAGCTATCTCTGAAGGAGCAACCTCTTTCCTTTTCACTGAGTACAAGTATGTGGGTATCTTCATGGTCTTCTTTGCCATTGTGATATTCCTTTTCCTTGGCTCCGTGGAAGGATTCAGCACAAGCCACCAGCCTTGCAAATATGATGAAACTAAGATTTGCAAGCCAGCTCTTGCCACCGCCCTTTTCAGTACAATTTCTTTCGTGCTTGGTGGCATCACATCAGTTGTTTCTGGTTTCCTTGGAATGAAAATTGCAACTTATGCCAATGCTAGAACCACCCTGGAGGCTAGAAAGGGTGTCGGGAAGGCTTTCATTACAGCATTTAGATCAGGTGCTGTCATGGGATTTTTGCTTGCAGCCAATGGCCTTTTGGTTCTTTACATTACCATCAACCTATTCCAGATTTACTACGGTGAGGACTGGGGTGGTCTTTTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGACGAGTTGCTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTCGGCAAGGTAGAAAGAAACATTCCTGAGGATGACCCCAGAAATCCAGCTGTGATTGCTGATAATGTTGGTGACAATGTTGGGGATATTGCTGGTATGGGATCTGATCTTTTTGGTTCTTATGCTGAGGCGTCATGTGCTGCTCTTGTTGTTGCTTCCATCTCTTCTTTTGGGATTAATCACGAGTTTACTGCCATGCTGTACCCTCTCATTGTCAGTTCTGTGGGTATCGTTGTTTGTCTTATAACCACCTTATTTGCAACTGACATTTTTGAGATCAAGCTCGTAAAAGAAATTGAGCCAGCATTGAAAAAACAGCTCATTATTTCAACAGTGCTGATGACTGTTGGGATTGCAATTGTTAGTTGGATTGCACTCCCATCTTCCTTCACTATCTTCAATTTTGGAGTGCAGAAAGATGTCAAGAACTGGCAGCTATTCTTGTGTGTTGCTGTTGGTCTTTGGGCAGGGCTTATCATTGGATTTGTAACTGAGTACTATACTAGCAATGCATACAGTCCTGTGCAAGATGTTGCTGATTCCTGCAGGACTGGTGCTGCTACCAATGTTATATTTGGCCTTGCCTTGGGATACAAGTCTGTTATTATTCCAATTTTTGCTATTGCAATTAGTATTTTTGTTAGTTTCAGCTTTGCCGCCATGTACGGTATCGCTGTTGCTGCACTTGGAATGCTGAGTACCATAGCCACCGGATTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCTGGGATGAGTCACAGAATTCGAGAGAGAACTGATGCCCTTGATGCTGCAGGAAACACCACTGCTGCTATTGGAAAGGGGTTTGCTATTGGTTCTGCTGCCCTTGTGTCCCTGGCCCTCTTTGGTGCTTTTGTGAGCCGAGCTAATATCACAACAGTTGATGTGCTGACTCCAAAGGTTTTCATCGGTTTGATCGTGGGTGCTATGCTTCCTTACTGGTTCTCTGCCATGACCATGAAGAGTGTGGGAAAAGCCGCACTGAAGATGGTTGAGGAGGTTCGCAGGCAATTCAACACCATTCCAGGGTTGATGGAGGGAACTGCTAAGCCTGACTACGCCACATGTGTTAAGATCTCCACTGATGCTTCTATTAAAGAAATGATTCCACCCGGTGCTCTTGTCATGCTCACACCCCTCATCGTAGGAATCTTTTTCGGTGTCGAAACACTTTCTGGTGTCCTCGCCGGATCTCTGGTGTCTGGTGTACAGATTGCTATCTCTGCATCCAACACTGGTGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGTGCTTCTGAACATGCCAGAAGCCTTGGTCCTAAAGGCTCAGATTGTCACAAAGCTGCTGTTATTGGTGACACCATTGGAGACCCTCTTAAGGATACATCTGGTCCCTCACTTAACATCCTCATCAAGCTAATGGCTGTTGAGTCTCTCGTGTTCGCACCCTTCTTCGCTACCCATGGTGGCTTACTCTTCAAGATCTAA 2304 0.464 MGAVLLPDLGTEILIPVCAVIGIVFALFQWFLVSKVKITAATRDAASPDAAGKNGYNDYLIEEEEGINDQNVVLKCAEIQQAISEGATSFLFTEYKYVGIFMVFFAIVIFLFLGSVEGFSTSHQPCKYDETKICKPALATALFSTISFVLGGITSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYITINLFQIYYGEDWGGLFEAITGYGLGGSSMALFGRVAGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAALVVASISSFGINHEFTAMLYPLIVSSVGIVVCLITTLFATDIFEIKLVKEIEPALKKQLIISTVLMTVGIAIVSWIALPSSFTIFNFGVQKDVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRANITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGKAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1864 767 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 767 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja4g1864 767 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 763 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja4g1864 767 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja4g1864 767 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 767 - -
Lja4g1864 767 Pfam Inorganic H+ pyrophosphatase 21 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja4g1864 767 PIRSF H+-PPtase 11 766 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1864 Lja-Chr4 18281504 18286653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1864 5 631 Primary Pumps ATPases AT1G15690 88.694 0.0 1127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1864 K23025 - gmx:100775864 1395.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1864 4 18281504 18286653 Lja4g1864 4 18281504 18286653 ECH