Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1851 ATGGTGTTGAAAGTGAAGGGAGGAACAAGGCCACCATGGGTGGGACTTGGAGTTTCTGTGTGGGTTCAAATTGCTGTTGGAGTTGCCTACACTTTTCCACTCTACTCTCCTTCCTTCAAATCTGTTCTGGGTTTCAACCAGAGCCAGGTTGCACTCCTTGGTGTTGCCAATGATGTTGGTGAGAATGTTGGTCTTCTTCCTGGGATTGCCTCCAACAAGCTCCCACCTTGGCTCATGCTTTCCATTGGCTGTCTCTGCTCTTTCATCGGTTTTGGTCTCATCTGGCTCTCTATCACCCAAACACTCTCCCTTCCTTTCTTCTTGCTATGGATAGCACTTGTTATTGCTAACAACAGTTGTGCATGGTTAACCACTGCTGTTCTTGTAACCAACATGAGAAATTTCCCTGTCACTAGAGGCACCGTCGCGGGAATCCTGAAAGGTTATGGGGGGATCGCCGCTGCAATTTTCACTGAAATTTACAGGGTGGTTCTTAAAAACTCTCCTAGCAATTTCCTCTTGTTCCTTACCGTCGGTATTCCTGTTGTATGCTTCAGTGTGATGTTTTTTGTTCGACCTTGTACTCCGGCTTCTGCTGAAAATTCTGCAGAAAAAGGGCATTTTCTTTTTATCCAAGTTTCAAGTGTGTTCTTGGCTGTGTATCTACTTGCAAGAACAATACTTGACTACACTCTCAACATAAGTGATGCAGTGTCATATGTTCTAGTGGCTGTGATGATTCTCATTCTTATGGCTCCATTGGCTATTCCTGTAAAGATGACACTGTATCCCAGAAAAGCCACTGACTCAGAATCAGAAAAATCTGAGCAAACAGTTGAATCTTCAGAATTTCTGGTTCAAGAAGGCAAAGAAGATAATACAAAACCCCTCTTGCCATCTTCATCAGCCGGCACTCTTGAAAATTATTATGATACTGATGGCTCGTCCGATGTGGCTATGCTTCTTGCTGAAGGTGAGGGAGCAGTAGTTCCAGTGAGGAGGAGAAGGCCGAGACGAGGAGAAGATTTTACATTTGCTGAGGCTCTAGTAAAGGCCGATTTCTGGCTACTATTTTTTGTGTATTTTGTTGGTATTGGAACTGGGATCACTGTTGTTAATAATCTGGCTCAAATAGGCACTGCACAAGGTGTTGAAGATACCACTATCCTGCTTTCGCTTTTCAGCTTTTTCAACTTTGTGGGGAGGCTTGGTGGAGGAGTTGTTTCTGAACATTTTGTCAAGACAAAAACAATTCCGCGGACATTTTGGATGACATGCACACAGATAACCATGATCATCATATACCTTCTGTTTGCCTATGCGATCAAGGGAACACTTTACCCTGCAATTGCATTTCTTGGTACCTGCTTCGGCGTGCAATTCTCCATACTGATCCCCACTGTCTCGGAGCTTTTTGGTTTGAAGCACTTTGGTTTATTTTTCAACTTCATGTGTTTGGCGAATCCACTCGGAGCACTCCTTTTCTCATTTCTGCTAGCTGGGCGTGTGTACGATAATGAGGTGGCGAGGCAGCTTGCTCTAGGACTCATTGATTCAGGTGTTTCATGTGTTGGTGCAGATTGTTTTAAGCTCACATTTTTTGTTCTGGCTGGTGTGAGTGCTGCTGGTGCCTTCTGCAGCATTATCTTGACTATGAGAATTAGGCCTGTTTACCAAATGCTTTATGCTGGTGGTTCTTTCAAGCTACCACAAACTTCAGGGCACTAA 1728 0.4416 MVLKVKGGTRPPWVGLGVSVWVQIAVGVAYTFPLYSPSFKSVLGFNQSQVALLGVANDVGENVGLLPGIASNKLPPWLMLSIGCLCSFIGFGLIWLSITQTLSLPFFLLWIALVIANNSCAWLTTAVLVTNMRNFPVTRGTVAGILKGYGGIAAAIFTEIYRVVLKNSPSNFLLFLTVGIPVVCFSVMFFVRPCTPASAENSAEKGHFLFIQVSSVFLAVYLLARTILDYTLNISDAVSYVLVAVMILILMAPLAIPVKMTLYPRKATDSESEKSEQTVESSEFLVQEGKEDNTKPLLPSSSAGTLENYYDTDGSSDVAMLLAEGEGAVVPVRRRRPRRGEDFTFAEALVKADFWLLFFVYFVGIGTGITVVNNLAQIGTAQGVEDTTILLSLFSFFNFVGRLGGGVVSEHFVKTKTIPRTFWMTCTQITMIIIYLLFAYAIKGTLYPAIAFLGTCFGVQFSILIPTVSELFGLKHFGLFFNFMCLANPLGALLFSFLLAGRVYDNEVARQLALGLIDSGVSCVGADCFKLTFFVLAGVSAAGAFCSIILTMRIRPVYQMLYAGGSFKLPQTSGH* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1851 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 573 - -
Lja4g1851 575 CDD MFS_Mch1p_like 11 544 - -
Lja4g1851 575 Gene3D MFS general substrate transporter like domains 349 558 IPR036259 -
Lja4g1851 575 Gene3D MFS general substrate transporter like domains 13 203 IPR036259 -
Lja4g1851 575 SUPERFAMILY MFS general substrate transporter 19 196 IPR036259 -
Lja4g1851 575 MobiDBLite consensus disorder prediction 269 302 - -
Lja4g1851 575 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 573 - -
Lja4g1851 575 Pfam Nodulin-like 12 258 IPR010658 -
Lja4g1851 575 SUPERFAMILY MFS general substrate transporter 227 556 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1851 Lja-Chr4 18140496 18144430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1851 3 575 Nodulin-like Gene Family AT1G80530 55.035 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1851 - - mtr:MTR_4g116210 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1851 4 18140496 18144430 Lja4g1851 4 18140496 18144430 ECH
Lja4g1851 4 18140496 18144430 Lja6g1854 6 45872668 45876414 PCT