Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1845 ATGATCATGGGATATCAAAAGCCTGCATGGTTGGAAGCTCTATACACAGAAAAGTTCTTTGTGGGGTGCTGTTACCATGAGAATGCAAAAAAGAATGAGAAGAATGTGTGCTGCTTAGATTGCTGCACAAGCATTTGTCCTCACTGCCTGCCTTCTCATCGCTACCACAGGCTTCTTCAGGTTCGGCGTTACGTTTATCATGATGTTGTCAGATTGGAAGATCTTCAGAAACTCATAGACTGCTCCAATGTTCAGGCCTATACCATCAATAGTGCTAAAGTGGTGTTCATCAAGAAGAGACCTCAAAACCGCCAATTCAAAGGGTCAGGAAACTACTGCACTTCCTGTGATAGAAGTCTCCAAGAACCTTTCATCCATTGCTCTCTAGGATGCAAGGTGGATTTTGTGCTGAAACACTACAAGGACCTCACTCCATACTTGAGGACATGCAACTCCCTTCAACTAAGCCCTGACTACCTAATCCCACAAGACATGGGGGATGAAGAGATGACTAATTCAACAGTTGTTGATTGTGATGAGCCAATGAGTTCATCTTCAGGATCAGAGAACATGAGCATGGCTTGCACTGAGATTGTGAGGAAGAGGAGGAGTGGATGGAGTGTGTGTGCAAAATTCATGACCAAAACCAATAGCTATAAGGTTTCAGATGAAGACATGGCCACAAGCATGAGTAGAAGAAAAGGCATCCCTCATAGATCTCCTCTGTGTTAG 732 0.4399 MIMGYQKPAWLEALYTEKFFVGCCYHENAKKNEKNVCCLDCCTSICPHCLPSHRYHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLTPYLRTCNSLQLSPDYLIPQDMGDEEMTNSTVVDCDEPMSSSSGSENMSMACTEIVRKRRSGWSVCAKFMTKTNSYKVSDEDMATSMSRRKGIPHRSPLC* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1845 243 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 243 - -
Lja4g1845 243 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 243 - -
Lja4g1845 243 Pfam PLATZ transcription factor 62 133 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1845 Lja-Chr4 18064458 18066069 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lja4g1845 PLATZ 3.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1845 - - gmx:100785737 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1845 4 18064458 18066069 Lja4g1845 4 18064458 18066069 ECH