Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1832 ATGGCGTTTGATCGGAATTCCGTCGTCAAGGATCTACACGCGGTGAACGTCGTTCCAGTCATGGCCGAGGAGCCTCTCATTTCACCGGCATCCATCGCCGCCACGCCTCATACTCCCAATTCAGCTCGAGACCTCTTCTATCCACCGCCGCCGGTGGGAGCCTGGTACGTCCGCCCCGCCGCGGCCGCTGCGCACCCTGCTGCTGTCGGGTTTAACTACGGCTCGCCTAACAGTTTTGGCAATATGGCCGCCGCGCCTGGGAATGCCTTGAATTTGGGGAATTGGGCTGGGGTTAATGGTTCCTGCAATGATGGTTCTCCTCATGGGAGCTCAAGGACCGGTGGTGGTGATGATGGCGGAGATGATTCCGTGTCGAGGAGGAAGGTGAAGTTCCTGTGCAGTTTTGGTGGGAGGATTTTGCCGAGGCCGAATGATGGAGTGTTGAGATATGTTGGAGGGCAGACAAGGATTATTAGTGTTAGGAAAGATGTGAGCTTCAGTGATTTGGTGCAGAAGATGGTTGACACTTATGGGCAGCCTGTGGCTATCAAGTACCAGCTTCCTGAGGAGGAGCTTGATGCATTGGTCTCGGTTTCGTGCGCGGATGATGTTGATAATATGATGGAGGAGTATGAGAAGTTGGTGGAGAGGTCTCCTGATGGTTCTGCTAAGTTAAGGGTTTTTCTGTTTTCTGCTTCAGAGGCTGACCTTTCTGGTGTGATGCAATCTGTGGACTTGCAAGATACTGGGCAGAGATACTTTGAGGCTGTGAATGGATTTACAGATGGAAATGGGATTAGTGGCGGAATCAAGAGGAAGGAGAGTGTAACAAGTGCTGCTTCAACACAGAATTCTGATTTGAGTGGGATTGAGACCCTTGATAGCTCATTTTCTAGTCAATGGGAGCCGGTTTCTTGTGCGATATCTTCAAAGGAGAATGTGGCAGCTTCTCCTGACACAAGTGCAAATTTGGGGGCTTCAGAGCCCAATTCAGCTGCTTACTCAGCTGCTTCTGCGGTTTCATTGGGTATGCCTGTGGCTAATAGCAGTTCAACTCCCACAACATATTCCCAGAATGAGGTTGACTTAGAAAAGCCTGTGCCTGTATCACAACAGCCATTTGGGTTGCAGCAATATGGGATGGAAATTCCACCCTCTTCACATTATTTGCAGCCTTTGATTGATCTGCGCCCGGAGGTTAGGAACCATGCAGATTATGTCCAATTGCATCCCCAGGCGGGGTTCCCCAATCCTCAGCTTTTAGGGCAGACTGGGCCTTCCTTCACACAACAGCAGTTTAATGATAATGCTTCTGGTTTAGCATTCCATCAGGCCATTCCTGGAGCACAAATACCCGTGACTCAACCATACTCACATGCTGCTGTAAGGCCGAATGTCATTCAGCAACAAACATTGATGCAACCACAGCATAATCGGTTGGACCAATACAGCGACGAAAGTGCATCAGGGCTCAGGATTATGCAGCTTCCTGCCGAGCACAGCTACAATACATACCAGGTTCCAGTGAATCATGCCCCATCTGTCATAGCTGGAGGTAATTATGGTTGGGTTCAGGTTCCTCCACAAGAGCAGGTTGTTTTCTCTGATGGTTTATTACCTCAACAACAGATACTGATCCCTGAGCAACTCAACAGAGTTGAGGGTTGTTCTATGTGTAAGACAAAGCTACCTCATGCCCATTCAGATCCAGTGGTCCAGGATCAGCATAATGGTGGTGCAGGTCCAGTTCCCGATTCAAGCCCTACTTACCGTAGTTTCCCGGTGGAAGACAGTTTAAAAACTCAAGGAACTAATATGTTTAAGCATATGGTGACAGCACCCTTGGAAAGCATTAGTGAACATGGGGCTGGGACTGGATCCAGACTTGCTAGCAAAGTGGAACCTTCTGATGGAGTACCTTGTAATAATAATAGTACTGGGCTTTCTCATAATCTTGTGCCTCTGCCTGAAGGTGGGAGGAATATAATGCAAAAGCCAGAAGAATTTGATCATGCAAAGAATTCATTTCTCCAGGAAACGACTGGAAGGACAGGTGGAGAACAGTCTCCTAGTGATGGACTCATGACCATGGGAACAGCAGCACTGTCTTATCCAGAGGCTGTCCACCGGCATGTGCCCGTTGAAAACGGGGTTAAACAGGATGTGGTTGTGAATAAACCTGTCAATAATGATATCCCTATGGTTGATAGAACAGCTATACTAACTTCCAAGTGCATGATTCAAGGATCTCCGAGAAAAAATACTAATGAGTTTACTGGTGTTGTTTCTAAATCAGATGTAGTAGATAATTGGATTAGACAGGACCATCTAAAACGTGTTGATGGAAGGATGGACACCCTCAAGATATGCAATCCTGAAGTTGATGTTAGTAATGATGACTGTTTGCTGCCACTTGAAAAACCTAATGGGAATGATAAACTAGATTACAACACTCGGAATTCTGTAGAGGGAGAGGTGATTCTGGATAACAACTTCGGCAGGCCAAAATTGGTAGCTGGTTCAAATCAAATTAAGATGACGGGCGTGCTGCCGTGTTCTTCTGAAGAAATTTCATTTGGTCACAATTCCAGGCCAGGGGAATACAATGAGAATTCTCCAAACTCACTTTTCAGCAATCAAGATCCCTGGGCTATACAGCATGGTACCTTCTTTCCACCTGCTAGACCTAACAACACTACATTGATGAAAGAAACCTATTCTCCCAGGGATCACTTTGGTGAGAATCCAGGCAGCTTTGGGAAACAAATTTCAGAAGCACAATTGGATGAAGGCCTCTACCAGTCGTTCATACAGAACTTAACTTTTGAACATGGTCAGTCAGCCAAAGGCTCAACAGAAGAAGAAGAACAACTTCAAGCTGTTGCAGAAGATGTAGCAGCTTCTGTTCTGCACCCATGCTCTCCTCCAAATCCTAACCTGCATGCCGAAGATGTTTCCTCTCATGAAAACATTGAGGATTGCGATGTTCAAGATAATCTAATAGATGTAATGTGTAGAAATAAAACTCTGGATGCCAAGAGCAAGCCACCAGAAAAGGCATGTTTTGGCTTTCCGGCATCGGGTGTTGGGAGATTGCAGGTTATAAAGAACTGTCACCTTGAAGAGCTGACAGAATTGGGTTCTGGTACCTTTGGGACTGTTTACCATGGAAAATGGAGGGGCACTGATGTTGCAATCAAACGAATTACTGATAGGTGTTTTGCGGGAAAGCCTTCAGAGCAAGAGCGCATGAGAGATGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTACGGTGTCGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAGTATATGGCTAATGGTTCTCTAAGAAATGCCTTGCAGAAGAGTGAGAGGAATCTTGACAAGCGCAAACGTCTTATCATTGCAATGGATGTGGCCTTTGGTATGGAGTACCTACATGGAAAAAACATTGTACACTTTGACTTGAAAAGTGACAACTTGCTGGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGACTGTCCAAAGTAAAATGTCAGACATTGATCTCTGGCGGTGTGAGAGGAACTCTACCGTGGATGGCGCCAGAACTACTAAACGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTCTTTTCATTCGGTATTGTGCTGTGGGAACTCTTAACTGGAGAAGAGCCATATGCTGATTTGCACTATGGTGCTATTATAGGTGGTATTGTGTCCAACACTTTGCGGCCTCTGGTTCCAGAATCTTGCGATTCAGAATGGAGATCACTGATGGAGAGGTGCTGGTCCTCCGAGCCATCAGAGAGACCAGGCTTCCCTGAGATTGTCAACGAATTACGTTCTATGGCAGCCAAACGACACAATCAACAGCTTCCCAAATGA 3954 0.4666 MAFDRNSVVKDLHAVNVVPVMAEEPLISPASIAATPHTPNSARDLFYPPPPVGAWYVRPAAAAAHPAAVGFNYGSPNSFGNMAAAPGNALNLGNWAGVNGSCNDGSPHGSSRTGGGDDGGDDSVSRRKVKFLCSFGGRILPRPNDGVLRYVGGQTRIISVRKDVSFSDLVQKMVDTYGQPVAIKYQLPEEELDALVSVSCADDVDNMMEEYEKLVERSPDGSAKLRVFLFSASEADLSGVMQSVDLQDTGQRYFEAVNGFTDGNGISGGIKRKESVTSAASTQNSDLSGIETLDSSFSSQWEPVSCAISSKENVAASPDTSANLGASEPNSAAYSAASAVSLGMPVANSSSTPTTYSQNEVDLEKPVPVSQQPFGLQQYGMEIPPSSHYLQPLIDLRPEVRNHADYVQLHPQAGFPNPQLLGQTGPSFTQQQFNDNASGLAFHQAIPGAQIPVTQPYSHAAVRPNVIQQQTLMQPQHNRLDQYSDESASGLRIMQLPAEHSYNTYQVPVNHAPSVIAGGNYGWVQVPPQEQVVFSDGLLPQQQILIPEQLNRVEGCSMCKTKLPHAHSDPVVQDQHNGGAGPVPDSSPTYRSFPVEDSLKTQGTNMFKHMVTAPLESISEHGAGTGSRLASKVEPSDGVPCNNNSTGLSHNLVPLPEGGRNIMQKPEEFDHAKNSFLQETTGRTGGEQSPSDGLMTMGTAALSYPEAVHRHVPVENGVKQDVVVNKPVNNDIPMVDRTAILTSKCMIQGSPRKNTNEFTGVVSKSDVVDNWIRQDHLKRVDGRMDTLKICNPEVDVSNDDCLLPLEKPNGNDKLDYNTRNSVEGEVILDNNFGRPKLVAGSNQIKMTGVLPCSSEEISFGHNSRPGEYNENSPNSLFSNQDPWAIQHGTFFPPARPNNTTLMKETYSPRDHFGENPGSFGKQISEAQLDEGLYQSFIQNLTFEHGQSAKGSTEEEEQLQAVAEDVAASVLHPCSPPNPNLHAEDVSSHENIEDCDVQDNLIDVMCRNKTLDAKSKPPEKACFGFPASGVGRLQVIKNCHLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMANGSLRNALQKSERNLDKRKRLIIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVLWELLTGEEPYADLHYGAIIGGIVSNTLRPLVPESCDSEWRSLMERCWSSEPSERPGFPEIVNELRSMAAKRHNQQLPK* 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1832 1317 SMART serkin_6 1040 1306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1832 1317 CDD PB1_UP2 132 230 - -
Lja4g1832 1317 SUPERFAMILY Protein kinase-like (PK-like) 1035 1302 IPR011009 -
Lja4g1832 1317 PANTHER SERINE-THREONINE PROTEIN KINASE 95 870 - -
Lja4g1832 1317 ProSiteProfiles Protein kinase domain profile. 1040 1307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1832 1317 Pfam Protein tyrosine and serine/threonine kinase 1043 1303 IPR001245 GO:0004672|GO:0006468
Lja4g1832 1317 MobiDBLite consensus disorder prediction 618 662 - -
Lja4g1832 1317 MobiDBLite consensus disorder prediction 637 651 - -
Lja4g1832 1317 ProSitePatterns Protein kinases ATP-binding region signature. 1046 1077 IPR017441 GO:0005524
Lja4g1832 1317 PRINTS Tyrosine kinase catalytic domain signature 1274 1296 IPR001245 GO:0004672|GO:0006468
Lja4g1832 1317 PRINTS Tyrosine kinase catalytic domain signature 1122 1135 IPR001245 GO:0004672|GO:0006468
Lja4g1832 1317 PRINTS Tyrosine kinase catalytic domain signature 1230 1252 IPR001245 GO:0004672|GO:0006468
Lja4g1832 1317 PRINTS Tyrosine kinase catalytic domain signature 1159 1177 IPR001245 GO:0004672|GO:0006468
Lja4g1832 1317 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 869 1309 - -
Lja4g1832 1317 MobiDBLite consensus disorder prediction 103 123 - -
Lja4g1832 1317 SMART PB1_new 143 232 IPR000270 GO:0005515
Lja4g1832 1317 Gene3D - 149 232 - -
Lja4g1832 1317 CDD STKc_MAP3K-like 1046 1303 - -
Lja4g1832 1317 Gene3D Phosphorylase Kinase; domain 1 1034 1126 - -
Lja4g1832 1317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1165 1177 IPR008271 GO:0004672|GO:0006468
Lja4g1832 1317 Gene3D Transferase(Phosphotransferase) domain 1 1127 1316 - -
Lja4g1832 1317 PANTHER SERINE-THREONINE PROTEIN KINASE 869 1309 - -
Lja4g1832 1317 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 95 870 - -
Lja4g1832 1317 SUPERFAMILY CAD & PB1 domains 144 237 - -
Lja4g1832 1317 Pfam PB1 domain 148 231 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1832 Lja-Chr4 17862551 17869290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1832 64 607 MAP Kinase Kinase Kinase AT3G46920 36.775 8.76e-82 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lja4g1832 PK_Tyr_Ser-Thr 3.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1832 - - lja:Lj0g3v0268659.1 2148.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1832 4 17862551 17869290 Lja4g1832 4 17862551 17869290 ECH
Lja4g1832 4 17862551 17869290 Lja6g1841 6 45749498 45756593 PCT