Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1814 ATGTTATCCAGAATCACTATTCTCCTCTGCTTCCAAGTTTTCCTCTCCACCACTCTGCACTTCCAAACCTCACAATCCCAACAACAACCATGGCACAAAATGGGCTACTGGTACAGCGGCAGCGGCCTCCCCATCTCCGACCTCAACTCCGCTCTCTACACCCACCTCATATGCGCCTTCGCCGACATCAACACCACCTCCTTCGAAATCTCCATCTCTGAATCAAACTCACAACCCTTCTCCACCTTCACAACCACCGTCCAACTCAAAAACCCCTCCATCACCACCCTCCTCTCCACCGGCGGCGACACCAACAGCGCCTCCATCAAAGCCATGATCAGCAACTCTTCCTCCAGAAAGCCCTTCATCGATTCCTCAATCCGCCTCGCCAGACAGTACGGTTTCCAAGGCCTTGATATTTCCTGGTCCACCATCGAAACACCAACTGATTCAGAAAATCTGGGTCAGCTTTTTGAAGAATGGAGAACCGCTGCAAAAACAGAGGTGGAAGATTCAACAAACAAAACGCTTCCAGAATTGATTTTAACTGCAGCGGTTCTAGGCTCACCTTATTTGGAAACTGGGACTTATCCAATGGAGTCTATTAGAACGAACCTGAACTGGGTTCATGTGAATGCTTATGATTATCACACACCTCTGGGACAGAACCTCACTGGGGCACCTTCAGCTTTGTATGACCCTGAAAGCGATTTTGACACAGATTTTAACATCAAGTCATGGATTGGGAATGGGGTTGCAGCTAGCAAATTGGTTTTGGGTTTACCTTTTTATGGGTATGTTTGGAAGCTGAAAAATTCTAGTGACAGGGGAATTGGTGCAGCTGCAACTGGTCCTGTAGATGATGATGGTGGAGCTAGAAGCTATAGGGATATCAAAAGTGATATTCAGCAGAATGGGGGTGTGGTGTTGTATAATGATACTTATGTGACGAATTATTGCTCGTTTGGATCGAGTTGGATTGGGTTTGATGATGTTGAGGTTGTGCAGAAGAAGGTGAAGTATGCTAGGGAAAATCAGCTGCTGGGTTACTATGTGTGGCATGTTTCCAATGATGATAATAAGTGGACACTAACTACTGCAGCTGCAGCTGAACAGGTGGGAAGCGAAAAAAGCAACTTGTGGTGGAAAATATTGGTGATAATTTTTAGTATAGTAGCTGCAGTTATTTTCATTATAGGTGTCACAATCTACCTCCGAAGGAAAAGAAAATTCAAATCAACCGGGATGTTTGATGGTGTCAAGTATTCTCAGTCTGGAGGGAACAAAAAAGGTGATGGACCTTTTCATGGTGATGCACCCAATTTACATGTCTATGGGTTTTCTGTCATTGAAGAAGCTACAAATAATTTTTCATATGAAAACAAGCTTGGAGAGGGTGGTTATGGTCCTGTTTACAAGGGCATCCTACCTGATGGTCTGGAAATAGCTGTTAAAAAACTATCAAAAGCTTCTACGCAAGGATTTGAGGAATTCCAAAATGAGGTCACGCTAACTGCAAGGCTACAGCATGTGAATCTTGTTCGGTTATTGGGTTTCTGCATTGAAAAAGAGGAGCATATGCTGGTATATGAGTACATGGCAAATAAAAGCTTGGACTTCTACCTCTTTGATCCTGTTAGGCGACATATGTTAGATTGGGATAAGCGTGTTGGCATCATTGAAGGAGTTATTCAAGGTCTTCTATATCTTCAAGAGTACTCTAGATTCACCATAATTCATAGGGACTTAAAAGCTAGCAACATTTTATTAGACCCTGAGATGAAGCCAAAGATATCAGACTTTGGGATGGCAAGAATATTCGCAAAAGATGAAGAAGAAGCAAACACTAGGAAGATTGTGGGAACATATGGTTATGCTCCTCCTGAATATATTAAGAGAGGTATATACTCCACTAAATCTGATGTTTATAGTTTTGGAGTCCTACTTCTACAAATTATAAGTGGCAAGAAGACATCTCGCTATTATGGAGAGAATGAAGATGTAAAGCTCTTAGAATATGCTTATGAGTTATGGAAAGAAGGAAAAGGCATGGAGTTTGTGGATCCTTCACTTGATGATGCATCTTCAACTTGCAAACTAATGAGATGCATGCAAATTGCTCTGTTATGCGTCCAAGAAAGAGCAAATGATAGACCTTCCATGCTGGAAGTTACTTCGATGCTGAGAAATGAAAATAACTCTCTAGCATTCCCCCAAATGCCTGCATTTTCAAATGTGAAAGTGAAAGATGAGAAAGAAGTAAATGAGTGTCAACCCCTAGAAATTATTTCAGTCGATGATACAACCATCACTGAAATGGTCATGGGAAGATAG 2334 0.422 MLSRITILLCFQVFLSTTLHFQTSQSQQQPWHKMGYWYSGSGLPISDLNSALYTHLICAFADINTTSFEISISESNSQPFSTFTTTVQLKNPSITTLLSTGGDTNSASIKAMISNSSSRKPFIDSSIRLARQYGFQGLDISWSTIETPTDSENLGQLFEEWRTAAKTEVEDSTNKTLPELILTAAVLGSPYLETGTYPMESIRTNLNWVHVNAYDYHTPLGQNLTGAPSALYDPESDFDTDFNIKSWIGNGVAASKLVLGLPFYGYVWKLKNSSDRGIGAAATGPVDDDGGARSYRDIKSDIQQNGGVVLYNDTYVTNYCSFGSSWIGFDDVEVVQKKVKYARENQLLGYYVWHVSNDDNKWTLTTAAAAEQVGSEKSNLWWKILVIIFSIVAAVIFIIGVTIYLRRKRKFKSTGMFDGVKYSQSGGNKKGDGPFHGDAPNLHVYGFSVIEEATNNFSYENKLGEGGYGPVYKGILPDGLEIAVKKLSKASTQGFEEFQNEVTLTARLQHVNLVRLLGFCIEKEEHMLVYEYMANKSLDFYLFDPVRRHMLDWDKRVGIIEGVIQGLLYLQEYSRFTIIHRDLKASNILLDPEMKPKISDFGMARIFAKDEEEANTRKIVGTYGYAPPEYIKRGIYSTKSDVYSFGVLLLQIISGKKTSRYYGENEDVKLLEYAYELWKEGKGMEFVDPSLDDASSTCKLMRCMQIALLCVQERANDRPSMLEVTSMLRNENNSLAFPQMPAFSNVKVKDEKEVNECQPLEIISVDDTTITEMVMGR* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1814 777 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 31 375 IPR001223 GO:0005975
Lja4g1814 777 Gene3D Transferase(Phosphotransferase) domain 1 533 745 - -
Lja4g1814 777 SMART 2g34 31 358 IPR011583 GO:0008061
Lja4g1814 777 CDD STKc_IRAK 463 728 - -
Lja4g1814 777 SMART serkin_6 457 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1814 777 Gene3D Glycosidases 46 360 - -
Lja4g1814 777 SUPERFAMILY (Trans)glycosidases 32 374 IPR017853 -
Lja4g1814 777 Gene3D Phosphorylase Kinase; domain 1 435 532 - -
Lja4g1814 777 ProSiteProfiles Protein kinase domain profile. 457 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1814 777 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 19 25 771 - -
Lja4g1814 777 Pfam Protein tyrosine and serine/threonine kinase 459 727 IPR001245 GO:0004672|GO:0006468
Lja4g1814 777 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 771 - -
Lja4g1814 777 Pfam Glycosyl hydrolases family 18 34 358 IPR001223 GO:0005975
Lja4g1814 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Lja4g1814 777 SUPERFAMILY Protein kinase-like (PK-like) 441 750 IPR011009 -
Lja4g1814 777 CDD GH18_plant_chitinase_class_V 29 364 - -
Lja4g1814 777 Gene3D - 263 329 IPR029070 -
Lja4g1814 777 SUPERFAMILY Chitinase insertion domain 264 329 IPR029070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1814 Lja-Chr4 17617972 17623007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1814 445 773 Receptor kinase-like Gene Family AT3G45860 52.663 2.17e-113 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja4g1814 Glyco_hydro_18 9.6e-65 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1814 - - lja:Lj1g3v0177810.1 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1814 4 17617972 17623007 Lja4g1814 4 17617972 17623007 ECH