Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1785 ATGGGTTTGGGAGTGTTTGGATCTGTTCTGGTTTTGACACTTTTATTCAAGCACTTGGTGTCCCAACAACCAAACACTGATGAGTTTTTTGTGTCTGAGTTCTTGAGGAAGATGGGTGTAACAAACTCCTCTCAAGGCTACAACTTTTCTTCTTCTGTTTGTTCATGGCAAGGGGTGTTCTGTGATGCCAATAAAGAGCATGTTGTTGACTTGGTGCTTCCTGGTATGGGCCTTTCAGGTCCTATTCCTGATAACACCATAGGGAAGCTCAGCAGGCTTCAAAATTTGGATCTCAGCTGCAACAGAATCACTGGTTTGCCTTCAGATTTCTGGAGTTTAACCTCTCTCAAGAGGCTCAACCTCTCTTCCAATCAGATTTCTGGTGCATTGACTAGCAACATTGGGAACTTTGGTTTGCTACAAGACTTTGACTTGTCCAGCAACAATTTCTCTGAGGAGATTCCTGAAGCTTTGAGCTCTCTTGTGAGTCTTCAGGTCCTGAAACTTGACCACAACAGGTTTGATCAAAGCATACCTTCTGGGATTCTCAAGTGCCAGTCTCTTGTTTCAATTGATCTTTCATCAAATCAGCTGAATGGAACACTCCCTGATGGTTTTGGTGTTGCATTTCCTAAGCTTAGGGCCTTGAATCTTGCTGGGAATTATATCTATGGAAGGGGTTCAGATTTTTCTGGGTTGAAGTCCATTGTGAGCCTCAACATATCAGGCAATTCATTTCAGGGTTCTCTCATGGGGGTGTTGCTGGAAAAGGTTAAGGTCATGGACCTTTGCAGAAACCAGTTTCAAGGTCACATTCCTCAGGTACAGTTCAACTCTGATTACAATTGGTCTCATTTAATTTATCTGGATTTGTCAGAGAATCAACTTAGTGGGGAAGTTTTCCAGAATTTGAGTGAGTCCCTGAATCTAAAGCACCTGAATCTTGCACACAATAGATTTTCCAGTCAGAAATTCCCACAGATTGAAATGCTTCCAGGACTGGAATATCTGAACCTGTCCAATACTAGTCTTTTTGGTCACATTCCTGATGAAATCTCACAACTCAGTAATTTGAGTGCACTTGTTCTTTCTATGAATCATCTTGATGGGAAAATTCCCTCACTGGGGAATAAACACCTCCAAGTTCTTGACCTTTCACACAACAATTTGAGTGGAACAGTCCCTCAATCTGTGTTGAATAAAATCCTGTGGATGGAGAAATACAACTTCTCTTATAACAACTTAACCCTCTGTGCTTCAGGAATCAAACCCGATATCCTGCAAACAGCATTCATTGGCATAGAGAACGATTGCCCAATCGCTGCGAACCCGACTCTTTTCAAAAGAAGAGCCACTGGACACAAGGGAATGAAGCTGGCTCTGGTATTGAGCTTGTCCATGATTTGCCTCCTTGCTGGACTTTTGCTCCTAGCATTTGGTTGCAGAAGGAGAACAAAAAAGTGGGAAGTTAAACAAACTTCATACAAAGAAGAACAGAACATTTCAGGTCCTTTTTCCTTCCAAACTGATTCAACAACTTGGGTGGCTGATGTTAAGCAAGCAACATCAGTCCCAGTAGTGATATTTGAGAAGCCATTGTTGAATATCACATTTGCAGACCTCTTATCTGCAACTTCTAATTTTGACCGCGGTACCCTATTAGCTGAAGGAAAATTTGGGCCAGTCTATAGAGGCTTTCTGCCTGGAGGTATTCATGTAGCAGTTAAAGTGCTAGTTGTTGGGTCTACATTGACAGATGAAGAAGCTGCAAGAGAGCTTGAGTTTCTTGGTAGAATCAAGCACCCAAATCTTGTTCTTCTAACTGGATATTGCTTAGCTGGGGATCAGAGAATTGCCATATATGATTACATGGAGAATGGGAACTTGCAAAACCTGCTTTATGACTTGCCACTTGGGGTTCTGCACAGCACAGATGACTGGAGCACTGACACATGGGAAGAACCTGACAATAATGGGATTCAAAATGCTGGCTCTGAAGGGTTACTCACAACCTGGAGTTTTCGGCACAAGATTGCCCTCGGCACCGCGCGAGCATTGGCATTCTTGCATCATGGATGTTCACCTCCAATCATTCACAGAGCTGTTAAAGCTAGCAGTGTTTACTTGGACTATGACTTGGAGCCGAGGTTGTCTGATTTTGGGCTGGCCAAGATCTTTGGAAGTGGCTTAGATGAAGAGATTGCGCGCGGCTCGCCCGGTTATGATCCGCCGGAGTTTACTCAGCCAGACTTTGATACCCCAACAACAAAATCTGATGTGTACTGTTTTGGAGTTGTTCTCTTTGAACTACTTACTGGAAAGAAGCCAGTTGAAGATGATTACCATGATGATAAAGAAGAAACCTTGGTTAGTTGGGTCAGAGGGCTAGTGAGGAAGAACCAAACTTCAAGAGCTATTGATCCCAAAATTCGCGATACAGGACCGGATGAACAAATGGAAGAGGCCCTCAAGATTGGTTATCTGTGCACTGCTGATCTCCCCTTCAAACGACCAACCATGCAGCAAATAGTTGGACTTCTGAAGGATATTGAACCTGCAACAACTAGTTAG 2571 0.4321 MGLGVFGSVLVLTLLFKHLVSQQPNTDEFFVSEFLRKMGVTNSSQGYNFSSSVCSWQGVFCDANKEHVVDLVLPGMGLSGPIPDNTIGKLSRLQNLDLSCNRITGLPSDFWSLTSLKRLNLSSNQISGALTSNIGNFGLLQDFDLSSNNFSEEIPEALSSLVSLQVLKLDHNRFDQSIPSGILKCQSLVSIDLSSNQLNGTLPDGFGVAFPKLRALNLAGNYIYGRGSDFSGLKSIVSLNISGNSFQGSLMGVLLEKVKVMDLCRNQFQGHIPQVQFNSDYNWSHLIYLDLSENQLSGEVFQNLSESLNLKHLNLAHNRFSSQKFPQIEMLPGLEYLNLSNTSLFGHIPDEISQLSNLSALVLSMNHLDGKIPSLGNKHLQVLDLSHNNLSGTVPQSVLNKILWMEKYNFSYNNLTLCASGIKPDILQTAFIGIENDCPIAANPTLFKRRATGHKGMKLALVLSLSMICLLAGLLLLAFGCRRRTKKWEVKQTSYKEEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVLLTGYCLAGDQRIAIYDYMENGNLQNLLYDLPLGVLHSTDDWSTDTWEEPDNNGIQNAGSEGLLTTWSFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIARGSPGYDPPEFTQPDFDTPTTKSDVYCFGVVLFELLTGKKPVEDDYHDDKEETLVSWVRGLVRKNQTSRAIDPKIRDTGPDEQMEEALKIGYLCTADLPFKRPTMQQIVGLLKDIEPATTS* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1785 856 ProSiteProfiles Leucine-rich repeat profile. 92 113 IPR001611 GO:0005515
Lja4g1785 856 Gene3D Ribonuclease Inhibitor 30 178 IPR032675 -
Lja4g1785 856 Gene3D Transferase(Phosphotransferase) domain 1 624 855 - -
Lja4g1785 856 SMART LRR_typ_2 331 355 IPR003591 -
Lja4g1785 856 SMART LRR_typ_2 378 401 IPR003591 -
Lja4g1785 856 SMART LRR_typ_2 113 137 IPR003591 -
Lja4g1785 856 SMART LRR_typ_2 90 112 IPR003591 -
Lja4g1785 856 SMART LRR_typ_2 161 185 IPR003591 -
Lja4g1785 856 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 852 - -
Lja4g1785 856 Gene3D Ribonuclease Inhibitor 179 278 IPR032675 -
Lja4g1785 856 Gene3D Phosphorylase Kinase; domain 1 508 623 - -
Lja4g1785 856 Pfam Leucine Rich repeat 377 392 IPR001611 GO:0005515
Lja4g1785 856 ProSiteProfiles Protein kinase domain profile. 548 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1785 856 PRINTS Leucine-rich repeat signature 113 126 - -
Lja4g1785 856 PRINTS Leucine-rich repeat signature 93 106 - -
Lja4g1785 856 Pfam Leucine rich repeat 187 245 IPR001611 GO:0005515
Lja4g1785 856 Pfam Leucine rich repeat 82 126 IPR001611 GO:0005515
Lja4g1785 856 SUPERFAMILY Protein kinase-like (PK-like) 534 849 IPR011009 -
Lja4g1785 856 Gene3D Ribonuclease Inhibitor 279 440 IPR032675 -
Lja4g1785 856 SUPERFAMILY L domain-like 48 419 - -
Lja4g1785 856 Pfam Protein tyrosine and serine/threonine kinase 552 845 IPR001245 GO:0004672|GO:0006468
Lja4g1785 856 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 852 - -
Lja4g1785 856 ProSiteProfiles Leucine-rich repeat profile. 379 400 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1785 Lja-Chr4 17280235 17283796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1785 63 854 Receptor kinase-like Gene Family AT4G39400 34.321 6.42e-110 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lja4g1785 PK_Tyr_Ser-Thr 2.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1785 - - gmx:100787157 1413.67