Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1775 ATGGGTTCTTTAACTAGAGGCTTTTCAATGTTCATGATCATGTTCTCAATGTGGCTGCTGCTACTTTCCTTCTCCCAAGCTCTAGAGTTTGTGGTTGGAGGCAATGACAACTCATGGAAGGTTCCGGTTCGTTCACAAGATTCACTCAGCCAGTGGGCTCAGAGTAACCGATTCAGCATCGGTGATTCACTCATTTTTACATACGACAACGAAACAGAATCGGTGCACGTAGTGAATGAGGAGGACTATTTAAAGTGCAAGGTAGAGGGGGAAGACCATGAGGTATACTTGGAAGGGTATAACAAGGTGGTGTTTAACAGATCAGGATCACATCTCTTTATCAGTGGAAAAGATGATCACTGCAAGATGGGGTTGAAGCTTGCAGTGGTTGTCATGTCTCACAGACACCACACAGAAATATTGTCTAGTAACTCGGATCCGTCATCACTTTCACCATCACCTTCGCCGGCTCCTTCATCTTCATCTTCACCTACACCTTCACCTTCACCTGCAAGTAATGGTGTTGCTAGCATTTCAGGCAGTGGATTCATCATGTGGATGGGAGTTGCATTGGTGATGTTGTTCTTCTTATAG 594 0.4478 MGSLTRGFSMFMIMFSMWLLLLSFSQALEFVVGGNDNSWKVPVRSQDSLSQWAQSNRFSIGDSLIFTYDNETESVHVVNEEDYLKCKVEGEDHEVYLEGYNKVVFNRSGSHLFISGKDDHCKMGLKLAVVVMSHRHHTEILSSNSDPSSLSPSPSPAPSSSSSPTPSPSPASNGVASISGSGFIMWMGVALVMLFFL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1775 197 MobiDBLite consensus disorder prediction 140 173 - -
Lja4g1775 197 ProSiteProfiles Phytocyanin domain profile. 28 133 IPR003245 GO:0009055
Lja4g1775 197 SUPERFAMILY Cupredoxins 27 133 IPR008972 -
Lja4g1775 197 MobiDBLite consensus disorder prediction 151 165 - -
Lja4g1775 197 Gene3D - 26 134 IPR008972 -
Lja4g1775 197 Pfam Plastocyanin-like domain 39 124 IPR003245 GO:0009055
Lja4g1775 197 PANTHER EARLY NODULIN-55-2 13 193 - -
Lja4g1775 197 PANTHER BLUE COPPER PROTEIN 13 193 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1775 Lja-Chr4 17219415 17221527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1775 12 195 Phytocyanin Superfamily AT2G25060 34.783 3.44e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1775 - - gmx:100784860 152.14