Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1765 ATGCAGCAAGGTGATCAAACCGTTCTCAGCTTGAGGCCTGGCGGTGGTCGTGGAACCAGACTCCTCGCTCCCAGATTCGATTCCTCCTCTGCTTCCTCCGCTGATCTCCCTCTCCTCCGCCCCCACGGCGCCGCGCTTCCCAACTTCTCCATCAAGGCTGGAGATTCGCGGTTTGAGGGCCGTGAGCGCATTCGCTATACCAGAGATCAGCTTTTACAGCTTAGAGAGGCTGTTGAGACCCTTGATGATATTTTAAAGATCAAACAAGATATTGACGCTGAACTTCTTGGTGAAGACCAAACTTGGGGCCGCTCAGAAAACAATCCCCCACAACAAGTTCAAAATCGATATTCTGAACCAGATAACCGTGACTGGCGTGGTCGGTCTGGGCAACTTCCTGCTAATGCTGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAGAGAATTCAGTAATGCTAGTCAGGTTAATCGGCAAGACCAACAGAATTCTCAGTATGGAAGGGCGCAAATCTCTTCTAACCAAGGGGGAGGACCTGCTACTCTAGTCAAGGCTGAGGTACCATGGTCAGCTAGAAGGGGAAGTGTATCTGAAATGGATCGTGTCTTGAAGACTGTAAAAGGAATACTCAATAAGTTGACTCCTGAGAAATTTGATCTTCTGAAGGGTCAGTTGATCGATTCTGGCATTACATCAGCTGACATATTGAAGGTAGTGATTTCGCTCATATTTGAAAAGGCGGTGTTGGAGCCAACATTTTGTCCCATGTATGCTCAGCTGTGTCAAGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGAAGAGCCTGGTGGGAAAGAAATAACTTTCAAGCGAGCACTCTTGAATATCTGCCAGGAGGCTTTTGAGGGTGCAGAAAAACTGAGGGAAGAATTAAGGCAGATGACAGCTCCTGAGCAGGAGATGGAGCGTCGTGACAAGGAAAGACTTCTCAAGCTTCGTACGCTTGGAAACATTCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGTTATTAGGAACCTCTGACAGCAAGGAGTGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGGCATATAAATGATGTGTACTTTATCCGATTGAAAGATTTGGCCTCAAACCCCCAACTTGCACCACGGCTGAGGTTTATGGTCCGTGATGTTATAGATTTGCGAGCTAATAAATGGATTCCGAGACGTGAAGAGATTAAAGCCAAAACCATTACTGAAATTCATTCAGAGGCAGAAAAAAATCTCGGACTTCGTCCTGGTGCCACTGCAAGTATGAGAAACCTCCGTGGCGTAGTTTCTGGTGCTCCTGGAAATACCGGCCCTGGGGGCTTCCCCCGGCCTGGTACTGGAGGTTTAATGCCTGGGATGCCAGGGACAAGGAAGATGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAAGTGCCTAGGACTCGGTCGATGTCAAGAGGAGATGTGTCAGGCATGCAAGTTGGAGGACGTGGTCAGGCTCCATTCGTTTCAAAGTCAACAGCCCTAAACACTAAGCTACTACCTCAAGGTAGTGGTGGACTTATAAGTGGGAGAAATAGTGCCCTAGTGCATGGAGGTGGTGCTCCTTCTGCTCGTCCATCAAACATTGGTTTAAGTGCTGAGCCTGCACCTGAAATCCCTTCACCTGTTAAACCAATTCCTGCCGTACCCTCTCCACAGGCTCCAGCTGCAAAATTGAATACTGCTGATCTTCACCGCAAAACTGTTTCTCTTCTGGAGGAATATTTTAGTGTTCGGATTTTGGATGAGGCATTACAATGTGTGGAGGAACTTAAGGCTCCAGCTTATCACCATGAGGTTGTCAAGGAAGCCATTGCCCTTGCACTAGATAAAAGTCCGCCATGCGTTGAACCGGTTGCCAAACTTCTGGAGCATCTGTTTAAGAAGAAGATTCTTTCAGCTAGCGACATAGGGACTGGATGTTTGTCGTTTGGTTCTACGCTAGATGATATTGGCATAGATTTACCCAAAGCACCAAGTAATTTTGGTGAGATAATAGGAAAACTAATTTTGGCTGGGGGTTTGGATTTCAAGGTGGTGAGTGAAATCCTTAAGAAGGTTGAGGATGACTGGTTCCAGAAAGCGTTTTTTGACTCTGCATTGCAGGTAATTACATCTTCTGCATCTGGGCAAGCTGTGGTGGATTCCCAAGCATCTGATGTTGAAGCCTGCCGGAGTGTGCTCAAGTGA 2337 0.4668 MQQGDQTVLSLRPGGGRGTRLLAPRFDSSSASSADLPLLRPHGAALPNFSIKAGDSRFEGRERIRYTRDQLLQLREAVETLDDILKIKQDIDAELLGEDQTWGRSENNPPQQVQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFSNASQVNRQDQQNSQYGRAQISSNQGGGPATLVKAEVPWSARRGSVSEMDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKVVISLIFEKAVLEPTFCPMYAQLCQDLNEKLPPFPSEEPGGKEITFKRALLNICQEAFEGAEKLREELRQMTAPEQEMERRDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGTSDSKECPAEENVEAICQFFNTIGKQLDESPKSRHINDVYFIRLKDLASNPQLAPRLRFMVRDVIDLRANKWIPRREEIKAKTITEIHSEAEKNLGLRPGATASMRNLRGVVSGAPGNTGPGGFPRPGTGGLMPGMPGTRKMPGMPGIDNDNWEVPRTRSMSRGDVSGMQVGGRGQAPFVSKSTALNTKLLPQGSGGLISGRNSALVHGGGAPSARPSNIGLSAEPAPEIPSPVKPIPAVPSPQAPAAKLNTADLHRKTVSLLEEYFSVRILDEALQCVEELKAPAYHHEVVKEAIALALDKSPPCVEPVAKLLEHLFKKKILSASDIGTGCLSFGSTLDDIGIDLPKAPSNFGEIIGKLILAGGLDFKVVSEILKKVEDDWFQKAFFDSALQVITSSASGQAVVDSQASDVEACRSVLK* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1765 778 Pfam MIF4G domain 203 429 IPR003890 GO:0003723|GO:0005515
Lja4g1765 778 SUPERFAMILY ARM repeat 196 431 IPR016024 -
Lja4g1765 778 SUPERFAMILY ARM repeat 608 766 IPR016024 -
Lja4g1765 778 MobiDBLite consensus disorder prediction 101 118 - -
Lja4g1765 778 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 777 - -
Lja4g1765 778 SMART ma3_7 613 725 IPR003891 -
Lja4g1765 778 MobiDBLite consensus disorder prediction 1 24 - -
Lja4g1765 778 Gene3D - 194 430 - -
Lja4g1765 778 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 777 IPR045208 GO:0003743
Lja4g1765 778 Pfam MA3 domain 614 725 IPR003891 -
Lja4g1765 778 ProSiteProfiles MI domain profile. 612 734 IPR003891 -
Lja4g1765 778 MobiDBLite consensus disorder prediction 99 180 - -
Lja4g1765 778 SMART if4_15 203 429 IPR003890 GO:0003723|GO:0005515
Lja4g1765 778 Coils Coil 288 318 - -
Lja4g1765 778 MobiDBLite consensus disorder prediction 147 179 - -
Lja4g1765 778 Gene3D - 606 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1765 Lja-Chr4 17105674 17111480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1765 1 776 Eukaryotic Initiation Factors Gene Family AT5G57870 65.949 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1765 K03260 - gmx:100781275 1228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1765 4 17105674 17111480 Lja4g1765 4 17105674 17111480 ECH