Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1733 ATGGGTTATCTTCCTTTAATTGCCATGATAGGTTTACAATGTTATTATGCAATTCTTGCCATCCTCACAAGAGCAGCTATGTTTGATGGATTGAGTCCACCAATCTTTGTAGTCTACAGGCACGGCATAGCCACTTTGGCACTCACACCTATCTTCTTTTCCTCTAAGAGGAGACAATCTTTAAAGAGTTCACTAACATTAAAGAGCTACTCTTGGATGTTTGTCACCTCTCTTATTGGAGCTACAGCAAATCAGAATGCATATTTTAAAGGTTTGTATTATGCATCTTCTACAGCAGCTACTGCAATGACTAATCTCTTACCGGCATTAACTTTTCTCATTGCAACAATTTTTGGATTTGAGAAAGTTGATCTGAGAAGCTTGAGATTCATCGCCAAGATATTAGGGACTGTTTGTTGCGTGGTTGGAGCATTAACCATGGCATTGCTGAAAGGACATAAGCTGCTAAACACAGAGTTCATTCCTTTTATTCATCTCACTGCATCTCGAGGTGACGATTGGCTCCTGGGGTGTCTTTTGCTGTTAGCAAGTAGCTTCTTTTGGTCAAGTTGGATGATCATGCAGGTACCAACTTCTTCATTCTGCCCAGACCATTTATTGTCAACCTTCGGTATGTGTTTCTTTGCAACAATACAGTCCGCCATATTTGCATTGCTCTCTGGGGAGAATCTTCAAGCATGGATGTTACCTTCACCTCTTCAAATTTCATGCTGTTTATATGGAGGAATTGGAATTGCTGTTAGCTTCTTCATTCAATCCTGGTGCATCTCAATAAGAGGTCCCTTGTACTGTGCAATGTTCAGCCCTTTAGCAACTGTCATCACAGCTTTGATAACTGCTACATTCCTACAGGAAGAGCTATATTTTGATGAGATTAAACAAGAGGTTCTACCGTCAAACATGCAGGGTGATGAGATAAGTAGCAGGGTAGATTTGGAAGAACCTCTTCTTCTACCAGAGAAGTCAGAACATGTAGACAAGAACAAGATGGAGCCCTGA 1020 0.4078 MGYLPLIAMIGLQCYYAILAILTRAAMFDGLSPPIFVVYRHGIATLALTPIFFSSKRRQSLKSSLTLKSYSWMFVTSLIGATANQNAYFKGLYYASSTAATAMTNLLPALTFLIATIFGFEKVDLRSLRFIAKILGTVCCVVGALTMALLKGHKLLNTEFIPFIHLTASRGDDWLLGCLLLLASSFFWSSWMIMQVPTSSFCPDHLLSTFGMCFFATIQSAIFALLSGENLQAWMLPSPLQISCCLYGGIGIAVSFFIQSWCISIRGPLYCAMFSPLATVITALITATFLQEELYFDEIKQEVLPSNMQGDEISSRVDLEEPLLLPEKSEHVDKNKMEP* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1733 339 Pfam EamA-like transporter family 6 145 IPR000620 GO:0016020|GO:0016021
Lja4g1733 339 Pfam EamA-like transporter family 176 296 IPR000620 GO:0016020|GO:0016021
Lja4g1733 339 PANTHER WAT1-RELATED PROTEIN 6 296 IPR030184 GO:0016021|GO:0022857
Lja4g1733 339 MobiDBLite consensus disorder prediction 314 339 - -
Lja4g1733 339 PANTHER WAT1-RELATED PROTEIN 6 296 - -
Lja4g1733 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 39 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1733 Lja-Chr4 16754671 16756997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1733 3 299 Nodulin-like Gene Family AT4G28040 45.973 8.09e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1733 - - gmx:100817369 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1733 4 16754671 16756997 Lja4g1733 4 16754671 16756997 ECH