Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1732 ATGGGTGGTGTAGGTGTTGGTCATCTTCCTGTAATTGCCATGATAGGTTTACAATTTTATTATGCAATTCTTGCCATTCTCACAAGAGCTGCTCTGTTAGATGGATTGAGTCCCCCAATCTTTGTAGTGTACAGGCAAGGCATAGCCACTTTGGCACTCACACCCATCTTTTTTTCCTCTAAGAGGAGACAATCTTTGAAGAGTTCATTAAGATTCAGGAGCTACTCTTTGATGTTTGCCACCTCTCTTATTGGAGTTACAGCAAATCAGAACACATATTTTCAAGGTTTGTATTATGCATCTTCTACAGCAGCTACTGCAATGAGTAATCTCATACCCGCCTTAACTTTTGTTATTGCAGCAATTTTTGGATTTGAGAAAGTTGATCTGAGAAGCTTGAGATTCATGGCAAAGATATTAGGGACTGTTTGTTGTGTAGTTGGAGCATTAACCATGGCATTGCTGAAAGGACATAAGCTGTTAAACACAGAGTTCATTCCTTTTATTCATCTCACTGCATCTCGAGGTGACGATTGGCTGCTGGGTTGTTCTTTACTGTTAGCAAGTAGTGTTTTCTGGTCAAGTTGGATAATCATGCAGGTACCAATTTCTTCATCCTGCCCAGACCATTTATTATCAACCTTCTGCATGTGTTTCTTTGCAACAATACAGTCAGCCCTATTTGCATTGTTCTATGGGGAGAATTTTCAAGCATGGATGTTACATTCACCTCTTGAAATTTCATGCTGTTTATATGGAGGAATTGGAATTGCTGTGAGCTTCTTCATTCAATCCTGGTGCATCTCAATAAGAGGTCCATTGTACTGTGCAATGTTCAATCCTTTATCTACAGTTCTCACAGCTTTCATAGCTGCTACATTCCTACAGGAAGAGCTATACATTGGAAGTTTGGTGGGGGCTGTTGGAGTCATCACTGGTTTATATATTGTGCTGTGGGGTAAAGCCAAAGAATTTGAAGAGATTAAACAAGAGGTGCTACAATCAAACATGCAGGGTGATGAGATAAGTAGCCAGGTAGATTTGGAAGAACCTCTTCTTCTGCCAGAGAAGTCAGAACATGTAGACAAGAGCAAGATGGAGCCATGA 1107 0.4038 MGGVGVGHLPVIAMIGLQFYYAILAILTRAALLDGLSPPIFVVYRQGIATLALTPIFFSSKRRQSLKSSLRFRSYSLMFATSLIGVTANQNTYFQGLYYASSTAATAMSNLIPALTFVIAAIFGFEKVDLRSLRFMAKILGTVCCVVGALTMALLKGHKLLNTEFIPFIHLTASRGDDWLLGCSLLLASSVFWSSWIIMQVPISSSCPDHLLSTFCMCFFATIQSALFALFYGENFQAWMLHSPLEISCCLYGGIGIAVSFFIQSWCISIRGPLYCAMFNPLSTVLTAFIAATFLQEELYIGSLVGAVGVITGLYIVLWGKAKEFEEIKQEVLQSNMQGDEISSQVDLEEPLLLPEKSEHVDKSKMEP* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1732 368 Pfam EamA-like transporter family 181 318 IPR000620 GO:0016020|GO:0016021
Lja4g1732 368 Pfam EamA-like transporter family 9 151 IPR000620 GO:0016020|GO:0016021
Lja4g1732 368 PANTHER WAT1-RELATED PROTEIN 10 350 - -
Lja4g1732 368 PANTHER WAT1-RELATED PROTEIN 10 350 IPR030184 GO:0016021|GO:0022857
Lja4g1732 368 MobiDBLite consensus disorder prediction 343 368 - -
Lja4g1732 368 MobiDBLite consensus disorder prediction 352 368 - -
Lja4g1732 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 323 - -
Lja4g1732 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1732 Lja-Chr4 16734297 16736858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1732 11 354 Nodulin-like Gene Family AT4G28040 46.369 7.97e-108 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1732 - - gmx:100817369 511.146