Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1722 ATGGATGCGCAAGCTAAGAAAAAGGCATTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAAAAACGCATTGAATCTCCCCTTGTGAGGTATAATGAATTTGATCAGCCTGTTTGCCGGGTTTGTGATGTTGTTTTGAAGTCTGAGTCTAATTGGGATGCACATCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAATCTTAAAGCAAATGCAGCAGGACTAACTCAAAACAATAATGCAAAGCCTGAAATTACCAAGGCCAAACCAGAACAGCCTTCAGTCTCACAATTCAAAATGCCCCAATCTTCACAAGAAGTGCCTAAACCTCAGTCATCGTCGGTGCTTCCACCAAATTTTTTTGATGACAGTCATGCAAGAAAGGCAAGCTCTGAAAAGGACTTGGAAAATGAGAAAGGTAATTTTCATGCCAATAATACTGCACAGTCAAAGGTTAGTAGTCAAGCAGCAATGGAGACTAGGCAGACATCAGACAAGACTGCAGATAAAGAGACCAAGCCAGTAAAAGAGGCTCTGCCGGAAGGCTTTTTTGATAATAAGGAAGCCGATTTGCGGGCACGTGGCATTAAGCCTGTTAAGCCAGATATCAAAGATGAATACAAGGAATTTGAGAAGTTGATTCAAGAGGACTTGAAGGAGGTGGATGATCGTTTTGAGGAAGAAGAGATTGATGCTGCTGAAATGATAGAAGAAGCTGAATCTGTAGAGCAAAAGAACTTCAGGGAGAAAGTGGAGTTGTTGAAGAGGAAGAGATTGGAGCAAAAGGCTTCTAAATCTGCGAAGCGTAGTAAATCTTCTGAGGTTGTAACCAAGGAGTCCAGACATGAAGAGTCATCCAGTGATGATGAAAGTGGTGGGAATTTCGCTGTGGACTGGAGAGCACAACATTTGTGA 915 0.4208 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESNWDAHQVSRKHREAISNLKANAAGLTQNNNAKPEITKAKPEQPSVSQFKMPQSSQEVPKPQSSSVLPPNFFDDSHARKASSEKDLENEKGNFHANNTAQSKVSSQAAMETRQTSDKTADKETKPVKEALPEGFFDNKEADLRARGIKPVKPDIKDEYKEFEKLIQEDLKEVDDRFEEEEIDAAEMIEEAESVEQKNFREKVELLKRKRLEQKASKSAKRSKSSEVVTKESRHEESSSDDESGGNFAVDWRAQHL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1722 304 MobiDBLite consensus disorder prediction 163 183 - -
Lja4g1722 304 Gene3D Classic Zinc Finger 32 70 - -
Lja4g1722 304 MobiDBLite consensus disorder prediction 71 183 - -
Lja4g1722 304 MobiDBLite consensus disorder prediction 71 119 - -
Lja4g1722 304 MobiDBLite consensus disorder prediction 260 304 - -
Lja4g1722 304 MobiDBLite consensus disorder prediction 125 140 - -
Lja4g1722 304 Coils Coil 218 245 - -
Lja4g1722 304 MobiDBLite consensus disorder prediction 260 289 - -
Lja4g1722 304 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Lja4g1722 304 Coils Coil 58 78 - -
Lja4g1722 304 PANTHER UNCHARACTERIZED 1 304 IPR040050 GO:0003676|GO:0005681|GO:0008270
Lja4g1722 304 MobiDBLite consensus disorder prediction 141 162 - -
Lja4g1722 304 Pfam Zinc-finger of C2H2 type 39 61 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1722 1 304 C2H2 Transcription Factor Family AT3G02860 53.067 9.39e-93 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1722 K13104 - gmx:100808515 417.927