Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1709 ATGGGATCCTCCTTCAGTTGCTGCGGTTCAGAGAAGGTTGAAGAAGGGCCAACATCATTTGGGTCAGTTAACAATTCATGGAGAATATTTACATACAAGGAGTTGCATGCAGCTACCGGCGGGTTCAGTGATGATAATAAGCTTGGTGAAGGTGGGTTTGGAAGTGTCTATTGGGGAAGAACTAGTGATGGTCTCCAGATAGCGGTGAAAAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCAGTGGAAGTTGAAGTTCTTGGAAGGGTTAGGCACAAAAATTTACTTGGTCTCAGGGGATATTGTGTCGGCGATGATCAACGGCTCATAGTCTACGATTACATGCCGAATCTTAGCCTGCTTTCTCATCTCCATGGCCAATTTGCTGTTGAAGTGCAACTGAACTGGCAAAAGAGAATGAAGATTGCAATTGGTTCTGCAGAAGGAATTCTGTACTTGCATCATGAGGTCACACCCCACATTATCCATAGGGACATCAAGGCAAGCAATGTGCTTCTGAACTCAGATTTCGAGCCTCTAGTCGCGGATTTTGGTTTCGCAAAGCTGATCCCAGAAGGCGTTAGCCACATGACAACCCGAGTTAAGGGTACCTTGGGATACTTGGCACCTGAATATGCCATGTGGGGAAAAGTCTCAGAAAGCTGTGATGTCTATAGCTTTGGAATTCTTCTGTTAGAGCTAGTAACCGGTAGAAAGCCGATAGAGAAGCTCCCGGGCGGCGTTAAGAGAACTATAACCGAGTGGGCTGAGCCTTTGATATCTAAAGGAAGGTTCAGGGATTTGGTTGATCCAAAGCTCAGAGGGAACTTTGATGAAGATCAAGTCAAACAAACTGTGAATGTTGCTGCTCTTTGTGTGCAGAGTGAGCCTGACAAGCGACCTAACATGAAGGAAGTGGTTAATCTTCTGAAAGGGCATGAACCTGATGCGAAAGTTACTAAGATGAGGATGGATAAGCAAATATTTCAATTTCTCTGTTGGCCAAGTTTGCATTTTGACACAATGGTACTTCATTCCCCTGCTAAAATTCTAATAGGACTCTCCTTAGACCAAGATGATAGCAAGGAGCTTCTCTCATGGGCAATAAGAGTTCTAGCCAATCCAAATGACACCATTGTGGCTGTGCATGTTCTTGTTGCTGAGGATAAGAAGAAGCGCGTCTCAGTTAGAAGAAGGCAATCACAGCTTAGGCAGGCCAAAGCATATGTTATATCTGTGCTTGCTGATTTTGCAAAGACTTGTTGGTCTAACCAGGTTAACTTGGAGGCCAAAGTGGCTCTCAGTTCCAGAGTTGGTAAAGGTTTAGTTGAGGAAGCCAAGTCCATCTCTGCTGATTTTCTTCTTCTTCGCGGCTCAAGAAACCAAACAAATAAATTTGGAACCTCTAGAGGAATTACCAAGTATTGCTTTGAGCATGCACATGAAGGTTGTACCATGGTCTCAGTTGGTAGATGTACAAAGGCAAGATCCAATTCAAATTCAACACATATTCAAGCAGAAGATAATCATAAACCAAGTTCAAGAAAGTTTAAGGAGGATAACAATGGTGACAAGGCTACCAATTCCCCTGCTCTGAAGGACTTCATCTCAGAATTGAAGACACATAACAGTTCACCAAGAACGGTACTCGATGCGCTCGAGGGACAATCAAACAGCACAGAATATGACACCTTCAGCACCAGGGTCTCAAGCACCACATACACCCCTTCATCAGATCTAACAAAGAGCCCATCCAAGTTAAGTACATCACAGTTCTCATTCAGGCTTATTATCTCATTCCTTAGTTCACCATTCAGAAAAAGAAACTTCAGCATATCCAAAAGTGAAAAGCATCAACCCTTGTTGAAGTGCTTCAGCTATGAAAAGATATCCCATGCTACTAATGATTTCCACCAAGATAATTTGGTTGGAAGAGGTGGGTACTCAGAAGTATACAGAGGTGATCTTTCTGATGGAGTTACCATTGCTGTGAAGAGATTAGCCAAGGACAACAACAATCCTAATAAGGAAAAAGAATTTCTTATGGAGTTAGGTGTTATAGGACATGTCTGTCATCCTAACACTGCAGGTTTATTAGGCTACTGCATTGAAAATGGGCTCTATCTGATTTTCAATTACTCTCAAAATGGAAACTTGTCAACTGCATTGCATGGTAAAGCAGGAAATTCACTTGACTGGCCAATCAGATACAAAATTGCTATTGGGGTTGCAAGGGGTCTTCATTATCTTCATAAGTGTTGCAAACGCAGAATAATTCACCGTGACATTAAAGCCTCCAATGTTCTTCTGGGTCCTGATTATGAACCACAGATTACTGATTTTGGGCTCGCAAAGTGGCTTCCTAACAAGTGGACTCACCATGCTGTGATCCCTGTGGAAGGAACATTTGGATACTTAGCACCAGAGTGCTTCATGCATGGAATTGTGGATGAGAAAACTGATGTTTTTGCATTTGGTATTCTTCTTCTGGAGATTGTAACTGGAAGGAGACCTGTTGATTCATCAAAGCAAAACCTTCTCCTATGGGCAAAGCCTTTCATGGAATCAGGGAGTATTGGTGAGCTAGCTGATCCAAGATTAGAAGGTAAATATGATGGAGAGCAACTGTATAGGGTAGTGCTTACAGCTTCATACTGTGTGAGACAAACTGCCACGTGGCGTCCACCAATGAGCGAGGTGTTGGAGCTGCTAACCAGTGGCCAAGACAGTGAGGTTGGAAAGAGCTGGAGGATTCCAAAGTTCACTTCTGATGAATTGGATGATTACTCAATGGTTTTTGGATATGATGTCCCCTCAGACGCATCTCTTGAGGATTATTTGTGA 2853 0.429 MGSSFSCCGSEKVEEGPTSFGSVNNSWRIFTYKELHAATGGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFAVEVQLNWQKRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGVKRTITEWAEPLISKGRFRDLVDPKLRGNFDEDQVKQTVNVAALCVQSEPDKRPNMKEVVNLLKGHEPDAKVTKMRMDKQIFQFLCWPSLHFDTMVLHSPAKILIGLSLDQDDSKELLSWAIRVLANPNDTIVAVHVLVAEDKKKRVSVRRRQSQLRQAKAYVISVLADFAKTCWSNQVNLEAKVALSSRVGKGLVEEAKSISADFLLLRGSRNQTNKFGTSRGITKYCFEHAHEGCTMVSVGRCTKARSNSNSTHIQAEDNHKPSSRKFKEDNNGDKATNSPALKDFISELKTHNSSPRTVLDALEGQSNSTEYDTFSTRVSSTTYTPSSDLTKSPSKLSTSQFSFRLIISFLSSPFRKRNFSISKSEKHQPLLKCFSYEKISHATNDFHQDNLVGRGGYSEVYRGDLSDGVTIAVKRLAKDNNNPNKEKEFLMELGVIGHVCHPNTAGLLGYCIENGLYLIFNYSQNGNLSTALHGKAGNSLDWPIRYKIAIGVARGLHYLHKCCKRRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPECFMHGIVDEKTDVFAFGILLLEIVTGRRPVDSSKQNLLLWAKPFMESGSIGELADPRLEGKYDGEQLYRVVLTASYCVRQTATWRPPMSEVLELLTSGQDSEVGKSWRIPKFTSDELDDYSMVFGYDVPSDASLEDYL* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1709 950 PANTHER OS08G0249100 PROTEIN 350 940 - -
Lja4g1709 950 PANTHER OS08G0249100 PROTEIN 19 329 - -
Lja4g1709 950 ProSiteProfiles Protein kinase domain profile. 640 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1709 950 Gene3D Phosphorylase Kinase; domain 1 604 716 - -
Lja4g1709 950 MobiDBLite consensus disorder prediction 511 526 - -
Lja4g1709 950 Gene3D Transferase(Phosphotransferase) domain 1 118 335 - -
Lja4g1709 950 Gene3D Transferase(Phosphotransferase) domain 1 718 921 - -
Lja4g1709 950 SUPERFAMILY Protein kinase-like (PK-like) 24 322 IPR011009 -
Lja4g1709 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Lja4g1709 950 PANTHER OS08G0249100 PROTEIN 350 940 - -
Lja4g1709 950 PANTHER OS08G0249100 PROTEIN 19 329 - -
Lja4g1709 950 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 350 460 - -
Lja4g1709 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lja4g1709 950 Pfam Universal stress protein family 352 484 IPR006016 -
Lja4g1709 950 Gene3D HUPs 343 492 IPR014729 -
Lja4g1709 950 Pfam Protein tyrosine and serine/threonine kinase 45 313 IPR001245 GO:0004672|GO:0006468
Lja4g1709 950 Pfam Protein tyrosine and serine/threonine kinase 642 851 IPR001245 GO:0004672|GO:0006468
Lja4g1709 950 CDD STKc_IRAK 48 315 - -
Lja4g1709 950 ProSiteProfiles Protein kinase domain profile. 42 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1709 950 Gene3D Phosphorylase Kinase; domain 1 17 117 - -
Lja4g1709 950 SUPERFAMILY Protein kinase-like (PK-like) 614 907 IPR011009 -
Lja4g1709 950 MobiDBLite consensus disorder prediction 500 533 - -
Lja4g1709 950 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524
Lja4g1709 950 CDD USP_Like 352 484 - -
Lja4g1709 950 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Lja4g1709 950 SMART serkin_6 640 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1709 950 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1709 Lja-Chr4 16282969 16290959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1709 628 907 Trihelix Transcription Factor Family AT5G38560 41.724 2.83e-64 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lja4g1709 PK_Tyr_Ser-Thr 4.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1709 - - ccaj:109809416 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1709 4 16282969 16290959 Lja4g1709 4 16282969 16290959 ECH