Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1694 ATGTGTAATAAAGGGTTTCAATGCTTGAGCGAGTCTGAGACTGTGATTGATCATCGACGACAGCAGCACTTTTTGATGGATAGTCCCACGGCGGTTCGATCACCGGCCACCGGTTCGAGTGATGATGGCCGGCGTGTTAAGTTCTTGTGTAGCTTCCTGGGGAGTATAATGCCCCGCCCACAAGATGGGAAGCTGCGGTATGTTGGCGGCGAGACGCGAATTGTGAGTGTTCCGAGGGAGATTAGCTATGAGGAGTTGATGGGGAAGATGAGAGAGCTTTATGATGGGGTTGCTGTGTTGAAGTATCAGCAGCCTGATGAGGATCTTGATGCACTTGTTTCTGTTGTTAATGATGATGATGTGGTTAATATGATGGAGGAGTATGATAAGTTGGGTTCAGGGGATGGGTTCACTAGGCTTAGGATTTTCTTGTTTTCGCAATCGGAGCAGGATGTTTCGTCGCACTTTATTGATGGGGATGATACTGAGAGGAGGTATGTTGATGCATTGAATAGTTTGAATGAGGCCTCTGACTTTAGGAGGATGCAACAAGCTGAGTTTCCTGTGATTGGTACTGTTGAGGATATCCATGTTGCTGAGCAGTTTTTTAATCCCATAAGTGTGGAGAATGGGCTTCATAGCCAGAGAAGTGGTGACCTATCAATGTCACAGTACAATTTGCATCACCTCGCGGTCCAGCACCCGCAACCTATTGGACAGAGGTTTAATGATATTGATGGTTCGTGGAATCCTGCATATTACTCTCCTAGACATCATGGTCACCATGAATTTCCATCTTCTCCTTCTGGTGCAAGATACCGCATGCCGTTTCCTGAATTACAGGAAAAGTACATTGATAGAGTGCCTGAAGATTATTCTAGACATTATGTAAATCACCATCCTGTGTATGACAATCAACAGCAGTATTCTGACAACGTTGTGTGGGTGCCAGCTGGTGCAGGACATGGTGAGAAATCTGGTTTTCCTGGCAACATTCCTCATGGTCCGCATGTTCTTGATGGGAACAGTGTATGTGAGCATTGTCGTATGGGTTTTCAGAGAGGTCAACCGCATCTTGAGCATCCTACTATTAGTAATGGACTTCCACCAGTAGCTAATCCATGTGTAGAATGCCCCTCAAATAGGGATGCTTTGGCGGTGAATGCTGATACGAAGTTACATCCTGTGATCTATCCCAATGAGCCTAATAATGATCTCAGGTCTGTTAATATTGATGCACAGAATCATGAGAGAGGATGGGGTTTACAGCATCCTCAGGTTGACGAATCAAGAGGACATGTATCTGGAACTGGGAGAGTGGGTGATCATTATGTTAGTGATGTTCCTGTTATAAATTTATCTGTCGGGCATGGTAGTATGACTGATGGACATACTTTGCCTTCCAATTATGTTCAACAAAGGGCTGGACATGAATTGGGGCCTGAACTGATCCCGGATCAAACCATGGCAGCTATTCCGCATCTAAAAATTCCTCCTGTGGAAGAATGCAGTGTGCGGTATGGAAATACAACTCCCCCCTATGGAGTAGATGGTAATTACCCAATGCCGCGTGGAAATGCTCCTGGTTATGCTTTTTGGAGAAATGCTCCGTCTCCAGCTCATATTGGACCATCTTATGAGGCAACTACTCCACCGCAGCCGGTGGACGGTATGATAAATGCTGGATTAATAAGGGGAGAGGGAAGTCCAGGATTTTTCATTGGAGCAGATAATCAAAGTCCTTGGGTTGATTCATCACAAAAACTATCAAGACATGATGGGTCAGCCATCCTGGAATATCCTTATGCAAATGCTCTGAGGTTGAGTCCGAAAGCCCTTGGTCAGGAAAATCAACACCCAATTACTTTAGATGCCATTCACCCCCCACAGGACATAAATACTGGAATCTTGTTGGAACCTGTGCAGCTGCCACAATTATCTGTCAATGTGGTTCAGAATAACGAGCTTTTAAGAAATGAAGCAATGAGCTTGCTTGGAGACGGAAAAGAGGCAATAAGGGAGGGAACAGTTGAAAACTCTAATGTGCAGAGTATATCTTTTTCAGAGCAAAAAGTTGCTGAGAATGCAAATGAAGTTGGTGCTTCTGTTGAGTCCAATAATCCAAGTTCAAAACATGCAGCAGAGTGTGGACATGTTGAGAAACTGGCTGATAAAGACCATTCTGATCCAGAAAATTGTAAGCATTTAGATGATCAGTTGAACTTCTTGCCTGATTTGATTGCTTCTGTACAAAAGGCTGCATTAGAAGGTGATGAGGTGAAAATTGCAGCTAATGATCATCAGCATGCCAATTCTCAAATGCATAATTCAAATCCCAAGGAAGAAACAGCAAATGAAGTAGAACCAGTGGATGCTCATGCTGATTTAGATTTGGACTCTGAAAATAACCATATTGTTACCTCTAAAATTGAGCCTACAGAGGCTGAAGCAGAAGCGGTTGCAAGGGGATTGCAGGCTATTAAAAATGATGATTTGGAAGAGATCCGTGAGCTAGGTTCTGGAACTTATGGGGCTGTTTATCATGGGAAGTGGAAAGGTTCTGATGTTGCCATTAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGGCCATCTGAAAGAGCAAGATTGATCGCAGATTTCTGGAAGGAGGCACTAATGCTGAGTTCATTGCATCATCCAAATGTTGTCTCCTTCTACGGTATTGTTCGTGATGGTCCCGATGGTTCTTTAGCAACGGTGACAGAATTCATGGTTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACAATAGATCGTCGTAAGAGGCTCATTATAGCAATGGATGCTGCATTTGGAATGGAGTATTTGCACGGAAAGAATGTTGTCCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGAGATCCACAACGGCCTGTCTGCAAGATTGGTGATTTGGGTTTATCCAAGGTTAAACAGCACACTCTAGTGTCTGGAGGGGTACGGGGAACTTTGCCATGGATGGCGCCTGAACTCCTTAGCGGGAAAAGCCATATGGTGTCAGAGAAGATTGATGTTTACTCATTCGGTATAGTCATGTGGGAATTACTCACCGGGGATGAACCTTATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATTGTAAACAGCACTTTACGTCCTCAAATCCCAACATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGCTGGGCTTCTGATCCTGCAGAGAGGCCATCATTTTCAGAAATTTCTAAGAAGCTGAGGAGCATGGCTGCTGCTATGAATGTGAAATAG 3318 0.4373 MCNKGFQCLSESETVIDHRRQQHFLMDSPTAVRSPATGSSDDGRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPREISYEELMGKMRELYDGVAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDVSSHFIDGDDTERRYVDALNSLNEASDFRRMQQAEFPVIGTVEDIHVAEQFFNPISVENGLHSQRSGDLSMSQYNLHHLAVQHPQPIGQRFNDIDGSWNPAYYSPRHHGHHEFPSSPSGARYRMPFPELQEKYIDRVPEDYSRHYVNHHPVYDNQQQYSDNVVWVPAGAGHGEKSGFPGNIPHGPHVLDGNSVCEHCRMGFQRGQPHLEHPTISNGLPPVANPCVECPSNRDALAVNADTKLHPVIYPNEPNNDLRSVNIDAQNHERGWGLQHPQVDESRGHVSGTGRVGDHYVSDVPVINLSVGHGSMTDGHTLPSNYVQQRAGHELGPELIPDQTMAAIPHLKIPPVEECSVRYGNTTPPYGVDGNYPMPRGNAPGYAFWRNAPSPAHIGPSYEATTPPQPVDGMINAGLIRGEGSPGFFIGADNQSPWVDSSQKLSRHDGSAILEYPYANALRLSPKALGQENQHPITLDAIHPPQDINTGILLEPVQLPQLSVNVVQNNELLRNEAMSLLGDGKEAIREGTVENSNVQSISFSEQKVAENANEVGASVESNNPSSKHAAECGHVEKLADKDHSDPENCKHLDDQLNFLPDLIASVQKAALEGDEVKIAANDHQHANSQMHNSNPKEETANEVEPVDAHADLDLDSENNHIVTSKIEPTEAEAEAVARGLQAIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNVVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSHMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNSTLRPQIPTWCDPEWKSLMESCWASDPAERPSFSEISKKLRSMAAAMNVK* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1694 1105 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 1105 - -
Lja4g1694 1105 Gene3D - 64 148 - -
Lja4g1694 1105 MobiDBLite consensus disorder prediction 768 788 - -
Lja4g1694 1105 ProSitePatterns Protein kinases ATP-binding region signature. 838 859 IPR017441 GO:0005524
Lja4g1694 1105 SUPERFAMILY Protein kinase-like (PK-like) 824 1093 IPR011009 -
Lja4g1694 1105 Gene3D Transferase(Phosphotransferase) domain 1 919 1105 - -
Lja4g1694 1105 SUPERFAMILY CAD & PB1 domains 62 154 - -
Lja4g1694 1105 CDD PB1_UP2 49 145 - -
Lja4g1694 1105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 957 969 IPR008271 GO:0004672|GO:0006468
Lja4g1694 1105 ProSiteProfiles Protein kinase domain profile. 832 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1694 1105 PRINTS Tyrosine kinase catalytic domain signature 1022 1044 IPR001245 GO:0004672|GO:0006468
Lja4g1694 1105 PRINTS Tyrosine kinase catalytic domain signature 914 927 IPR001245 GO:0004672|GO:0006468
Lja4g1694 1105 PRINTS Tyrosine kinase catalytic domain signature 951 969 IPR001245 GO:0004672|GO:0006468
Lja4g1694 1105 PRINTS Tyrosine kinase catalytic domain signature 1066 1088 IPR001245 GO:0004672|GO:0006468
Lja4g1694 1105 CDD STKc_MAP3K-like 838 1095 - -
Lja4g1694 1105 Pfam Protein tyrosine and serine/threonine kinase 833 1095 IPR001245 GO:0004672|GO:0006468
Lja4g1694 1105 SMART serkin_6 832 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g1694 1105 Gene3D Phosphorylase Kinase; domain 1 817 918 - -
Lja4g1694 1105 SMART PB1_new 60 145 IPR000270 GO:0005515
Lja4g1694 1105 Pfam PB1 domain 61 146 IPR000270 GO:0005515
Lja4g1694 1105 PANTHER - 27 1105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1694 Lja-Chr4 16029614 16037882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1694 40 1105 MAP Kinase Kinase Kinase AT5G57610 53.930 0.0 1052
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lja4g1694 PK_Tyr_Ser-Thr 8.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1694 - - gmx:100779077 1726.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1694 4 16029614 16037882 Lja4g1694 4 16029614 16037882 ECH
Lja4g1694 4 16029614 16037882 Lja6g1841 6 45749498 45756593 PCT