Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1691 ATGCAGAGACCAACGACCGATAAAATTGGTATGGGGAAAAGGACCCTGGAGAGTGGAGAAGATGAACAGCCTGAACGAAAGAGGCCTGCTCTTGCCAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTATTCTTCGGAGAGTTGTGAGTGAAGAAGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTCCAAGACTCAGTGGAAGGTCTTCTCCTCCTAAAATGATTGAAGCTCCTAATGGTAGAAACTTGCGGCTGCAATTTAGGTCCCGGCTGTCTCTTCCCCTATTCACGGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTCCTGAGTGATGCCACTAGTGGAAATGTTGTAACATCTGGACCTGAAGCCTCTATGAAACTTGATGTTGTTGTCCTTGAAGGTGATTTTAATAACGAAGATGATGAAGATTGGAATCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACGAGAAGGAAAGAGACCTTTGTTAACTGGGGACCTGCAAGTGACGCTCAAGGAAGGAGTTGGAACATTGGGGGAACTGACATTTACTGATAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTGGCCTGAAGGTGGCATCAGGTTTTTGCGAGTCTATACGGATTCGTGAGGCTAAGACAGTGGCTTTCACAGTTAAAGATCATAGAGGAGAATTATATAAAAAACATTATCCTCCTGCATTGAATGATGATGTGTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCAGGAATATTCACAGTTGAAGATTTTCTTCGGCTTGCAGTTAAAGATCAACAAAAACTGCGGAATATCCTTGGGAGTGGAATGTCAAACAAGATGTGGGAGGCTCTCTTAGACCATGCAAAGACTTGTGTTCTAAGTGGGAAGCTCTATGTTTATTATCCAGAAGATACAAGAAATGTTGGTGTTATTTTTAACAATGTCTATGAGCTGCGTGGCCTTATAACAGGAGAACAATTCTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCGTTGGTAAAGAAGGCCTATGACAATTGGGATCAGGTAGTAGAGTATGATGGCAAATCACTTGTGAATGCTGAGCAGAATAATAGTTCTGTTGAATCTGAAAATGAACTTCATCTAGAGTCAATTGATTATGGTAGTGGTTTGGGTCATCAACTGCAACTTCCCCTCCCAATGCCTGTTCCTTCTGAACAGCAAATGAATTCAGGGATGGCGGTTGGAGGTTATGAAAATAGTTTGGTAACAAGATATCCAACCCACTCATTAATTGCAAACTCCAACTCCCGGAGTCAGTTTGACAGCTCATTATATCTCTCTAGTGACCAATTAATAAGCAATGCTCATCAAACCCAAAGCACTAGGAATGATCATGGTACAGTAGGGTTAGCTCTTGGCCCTCCTCAATCATCAACATCAGGGTTCCATGCTGGTAGCTCCTCGGTTCAGTCGTCTACCCTAAATCCTTTTGATGATTGGTCGCAGAACAGGGACAAAGGGGTTGATGATTTCTTTTCAGAAGAAGAAATCCGCATTAGAAGTAATGAGATGCTAGAGAATGAAGATATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTCATTCCTCCATGAATGCTGAGGATGTCTATTCATACCCTTCATTCATGCCATCTCCGATGCCTAACATAGACGAGGATCGCTCTCGTCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGAGAGCGGCTGAGAGGCGGGCACAGATAGAGGAGATAGATGATTAG 1905 0.4388 MQRPTTDKIGMGKRTLESGEDEQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPPRLSGRSSPPKMIEAPNGRNLRLQFRSRLSLPLFTGGKVEGEQGAPIHVVLSDATSGNVVTSGPEASMKLDVVVLEGDFNNEDDEDWNQEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESIRIREAKTVAFTVKDHRGELYKKHYPPALNDDVWRLEKIGKDGSFHKKLNNAGIFTVEDFLRLAVKDQQKLRNILGSGMSNKMWEALLDHAKTCVLSGKLYVYYPEDTRNVGVIFNNVYELRGLITGEQFFSADSLTDSQKVYVDSLVKKAYDNWDQVVEYDGKSLVNAEQNNSSVESENELHLESIDYGSGLGHQLQLPLPMPVPSEQQMNSGMAVGGYENSLVTRYPTHSLIANSNSRSQFDSSLYLSSDQLISNAHQTQSTRNDHGTVGLALGPPQSSTSGFHAGSSSVQSSTLNPFDDWSQNRDKGVDDFFSEEEIRIRSNEMLENEDMQHLLRLFSMGGHSSMNAEDVYSYPSFMPSPMPNIDEDRSRPGRAVVGWLKIKAAMRWGFFIRKRAAERRAQIEEIDD* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1691 634 Pfam Calmodulin binding protein C-terminal domain 323 385 IPR046829 -
Lja4g1691 634 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Lja4g1691 634 MobiDBLite consensus disorder prediction 13 28 - -
Lja4g1691 634 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Lja4g1691 634 MobiDBLite consensus disorder prediction 1 28 - -
Lja4g1691 634 PANTHER OS02G0177800 PROTEIN 10 632 IPR012416 GO:0005516
Lja4g1691 634 PANTHER CALMODULIN-BINDING PROTEIN 60 B 10 632 - -
Lja4g1691 634 MobiDBLite consensus disorder prediction 482 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1691 Lja-Chr4 16000659 16007382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1691 1 629 Calmodulin-binding Proteins AT5G57580 67.395 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1691 - - cam:101488801 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1691 4 16000659 16007382 Lja4g1691 4 16000659 16007382 ECH