Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1679 ATGTTTATTACTGACTTCAAACTATTGATTGCAGTTGCCGTCATGGATACTGATGAGGTGTGCTCAATTGTTCTTGAGTTATCTGAAAAGGATCCTTTATTTGATAAGAAGAAGAAATTACTACAATGTAAGGGGTTTAGTCCCAAGGAACGGATATATCTCAACTCCTCAGAATCTGGTTGGGAGAATGCTACTGCAAAGAGGTTACTTGAGATAGAGCGAATCATACAGTTAAACGAGCTGGAACTTTATTTTGCTGAAGACAATGGTTGCACATCAGTGGATTTTTACAGCCCCAGGAATGAGTTGGAGGCGCTCAATTCAGTTGTCTTTCTCATCGACATATCTCTTTCCAGTTGTTCACATCTCCATACAAATATCCTGCAAGGGCTACGGCAAACAATGCTTGATTTAATTTCTGACTTTGGAGATAAAAATAGTGTGAAGGGAGTAGTTGAAATAGACCACAATTGTGATCAAGAAGAGCACATGATAGAGTGGGGTGAAAGCAACGGTTTAAAAACACAGTTAAAGATAGCTTATGTTGAAGGAGCAGGTCGGGGTGCGATTGCTACAAAAGATCTAAAAGTTGGAGACATCGCTCTAGAAATTTCTGCGTCCATTATCATTTCTGAGGAGCTTGTGCATGAAACTGATATGTATCAGGTCCTAAAAATGGTGGATGACATATCATCTGAGACAATATTGCTATTGTGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAAATATACTTTGACACACTCCCAGAAAAATTTAATACAGGATTGAGTTTTGGTATTGAAGCGATTGCAATGTTAGATGGAACCTTGCTATTTGAAGAGATAATGCTGGCAAGACAGCACCTGCATGCTCAATATGATGAGTTGTTTCCTGTTTTGTGTGATGAGTTTCCTGACATATTTCCACGAGAGCTGTACACGCGGGAAAAATTTATATGGGCTTGTGAACTTTGGTACTCGAATAGCATGAAGATAATGTATCCTGATGGAAAGCTGAGAACATGCTTGATCCCAATTGCTGGCTTTCTTAATCATTCTCTGTGCCCACATGTTATGCACTATGGCAAAGTAGACCCTTCAACAAATTCATTGAGGTTTTGTCTGTCAAGACCATGCAAATCTGGAGAAGAATGCTGCTTAAGCTACGGGAGCTTCCCCAGCTCTCATCTACTAACATTTTATGGTTTCTTACCTCAAGGAGAGAACCTGTATGATGTCATTCCCTTAGACATTGATGGCTCTGATGTTAATTCTATTGAGGATAAACCTGAGTCCAACTGGACTACTCACATGGTGCGCGGTACTTGGCTCTCCAATAATCACAGCATATTTCATTATGGCCTTCCCTCTCCATTACTGGACCATCTTCGGAAATCTCGAAGTCCCACGCTGCATACTAAGACTTACTTGCAAGGTAACTTAGAAAATGAGCTGGAAGTACTTGGAGATCTCATATGTATCTTTGATAACATGGTGGACAATATGGGTGAGATCGATCTTGATGACAGAGAAAACTGCGGTCTGGAAGAAAAATATGCCATGGATTATAAAAATCTACAAAGAAAAATTGCCTATTCTGTTTCATCTTCATGTCATAACGGTGTCAACTTAGTCAAGAATGAACTGTGCAAGTGCATGGCTGAGGATATCCTAGGTTAA 1689 0.3967 MFITDFKLLIAVAVMDTDEVCSIVLELSEKDPLFDKKKKLLQCKGFSPKERIYLNSSESGWENATAKRLLEIERIIQLNELELYFAEDNGCTSVDFYSPRNELEALNSVVFLIDISLSSCSHLHTNILQGLRQTMLDLISDFGDKNSVKGVVEIDHNCDQEEHMIEWGESNGLKTQLKIAYVEGAGRGAIATKDLKVGDIALEISASIIISEELVHETDMYQVLKMVDDISSETILLLWSMKEKYNCDSKFKIYFDTLPEKFNTGLSFGIEAIAMLDGTLLFEEIMLARQHLHAQYDELFPVLCDEFPDIFPRELYTREKFIWACELWYSNSMKIMYPDGKLRTCLIPIAGFLNHSLCPHVMHYGKVDPSTNSLRFCLSRPCKSGEECCLSYGSFPSSHLLTFYGFLPQGENLYDVIPLDIDGSDVNSIEDKPESNWTTHMVRGTWLSNNHSIFHYGLPSPLLDHLRKSRSPTLHTKTYLQGNLENELEVLGDLICIFDNMVDNMGEIDLDDRENCGLEEKYAMDYKNLQRKIAYSVSSSCHNGVNLVKNELCKCMAEDILG* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1679 562 SUPERFAMILY SET domain 162 413 IPR046341 -
Lja4g1679 562 PANTHER BNAA07G01600D PROTEIN 15 558 - -
Lja4g1679 562 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 15 558 - -
Lja4g1679 562 Pfam SET domain 186 393 IPR001214 GO:0005515
Lja4g1679 562 CDD SET_LSMT 177 407 - -
Lja4g1679 562 Gene3D set domain protein methyltransferase, domain 1 158 407 - -
Lja4g1679 562 Gene3D - 16 134 IPR036464 -
Lja4g1679 562 ProSiteProfiles SET domain profile. 175 393 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lja4g1679 SET 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1679 K19199 - gmx:100778605 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1679 4 15802743 15807974 Lja4g1679 4 15802743 15807974 ECH