Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1659 ATGTTGTTGTGTGATTCTCTCCTAGGTGAGCATAGTATTAACTGGCTGAGCTTTGAGGACGATCAACTCAGGCTTGCAGAGGTTGTTGCTGCGAGGAGCTACCCTGAATTTGCTTTGACATTCCAGTATCATATTGCAGAAGCTAAGATTTTTTTTGTTAAGCTTGCGGAAATTTGCAACTATGAAAAGGAACTGGAGGAGATGAAGAACATGACCAGACAAGAGTTTGTTGCTTCTCTACGAAGGAAGAGCAGTGGTTTCTCTAGAGGGGCCTCTATTTACAGAGGAGTGACAAGGCTTGCAGAGGTTGTTGCTGCGAGGAGCTACCCTGAATTTGCTTTGACATTCCAGTATCATATTGCAGAAGCTAAGATTTTTTTTGTTAAGCTTGCGGAAGCTAAGATGAATGAGAGAATAAGAAGATTTTCAATTTTGACTTCAAGGTAG 447 0.4161 MLLCDSLLGEHSINWLSFEDDQLRLAEVVAARSYPEFALTFQYHIAEAKIFFVKLAEICNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRLAEVVAARSYPEFALTFQYHIAEAKIFFVKLAEAKMNERIRRFSILTSR* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1659 148 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 58 100 - -
Lja4g1659 148 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 58 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1659 Lja-Chr4 15602715 15603955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1659 58 99 AP2-EREBP Transcription Factor Family AT1G51190 90.476 1.84e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1659 K09285 - qsu:112025300 85.8853