Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1649 ATGGAGACACAATCATCTAAACGCAGACGCGTTTATTCATTGGAACCAAGCAAAGTAGTGCAATCTTTATTTGCTAGAAATTATTTGAACTACTTAGTTCCAGCATTGATGAAGATAAAGGCAAAGAGTCCTACTTCTGCAGAAGATAGCTGCAGAGATTGTGATGTCAAGAAGAATGTTAAGTATGAAGTGGACATGGCAATGGTGTTCTCAGCACAAGGTTTTGCATGGAGTGAAGGTCTTAAACTCAAGCTTCAAAAGGATCATGATGTCAATGAAAATGTAGCTGCTGCAAACACAAGCTTTCTTAAAAGTGAGTCTAGTACTGAAGAAGGTTCATCAAGGATTTGTGACCAAAATGAAATTGTCCCTGTGGATTTCTGTGCAAACTCTAGTTCAACTTCAAAGTCTCAATCAGAGTCAGAGATGCCAGAACTGGAAAAGGGTTTAGGCAGAGAAGAAATTGAAGATGAGGAGGAGCAATTGAAGAGCCTGAGAAAGTTGGTACCTGGAGGAGAAGAGATTTGTGATGAAGACATGGTTGGTGAACTAGAGAGTTATGTAAGGTGTTTGCAAATGCAGGTGAATGTTCTTCAATGCCTGGTAGCAGAGACAAGTTGA 621 0.3994 METQSSKRRRVYSLEPSKVVQSLFARNYLNYLVPALMKIKAKSPTSAEDSCRDCDVKKNVKYEVDMAMVFSAQGFAWSEGLKLKLQKDHDVNENVAAANTSFLKSESSTEEGSSRICDQNEIVPVDFCANSSSTSKSQSESEMPELEKGLGREEIEDEEEQLKSLRKLVPGGEEICDEDMVGELESYVRCLQMQVNVLQCLVAETS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1649 206 MobiDBLite consensus disorder prediction 141 166 - -
Lja4g1649 206 PANTHER TRANSCRIPTION FACTOR BHLH146 3 204 - -
Lja4g1649 206 MobiDBLite consensus disorder prediction 130 166 - -
Lja4g1649 206 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 204 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1649 Lja-Chr4 15492508 15493169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1649 1 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 44.186 2.21e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1649 - - aprc:113852314 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1649 4 15492508 15493169 Lja6g2129 6 50212857 50213550 PCT